Gene
RNA
| Item | Value |
|---|---|
| gene id | G2031781 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 43169847 ~ 43170218 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2324072 | True | 372 | lncRNA | 0.47 | 1 | 43169847 | 43170218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515300 | LOC106583399 | coding | upstream | 8940 | 43084632 ~ 43160907 (+) |
| LOC110526703 | tm6sf1 | coding | upstream | 239366 | 42921887 ~ 42930481 (+) |
| LOC110511523 | pcsk6 | coding | upstream | 282909 | 42801870 ~ 42886938 (+) |
| LOC118944566 | LOC106587688 | coding | upstream | 429296 | 42726882 ~ 42748573 (+) |
| spg21 | spg21 | coding | upstream | 488458 | 42674297 ~ 42681389 (+) |
| LOC110506077 | LOC106562716 | coding | downstream | 460 | 43170678 ~ 43179902 (+) |
| LOC110506863 | LOC106594052 | coding | downstream | 39040 | 43209258 ~ 43425863 (+) |
| LOC110515557 | efl1 | coding | downstream | 269042 | 43439260 ~ 43535306 (+) |
| LOC118944556 | NA | coding | downstream | 389162 | 43559380 ~ 43567527 (+) |
| LOC110506869 | mex3b | coding | downstream | 422670 | 43592888 ~ 43597540 (+) |
| G2031778 | NA | non-coding | upstream | 4163 | 43165479 ~ 43165684 (+) |
| G2031679 | NA | non-coding | upstream | 178171 | 42991287 ~ 42991676 (+) |
| G2031516 | LOC106592318 | non-coding | upstream | 203000 | 42966280 ~ 42966847 (+) |
| G2031515 | LOC106592271 | non-coding | upstream | 204505 | 42962225 ~ 42965342 (+) |
| G2031792 | NA | non-coding | downstream | 30006 | 43200224 ~ 43200565 (+) |
| G2031818 | NA | non-coding | downstream | 100768 | 43270986 ~ 43271700 (+) |
| G2031863 | NA | non-coding | downstream | 228753 | 43398971 ~ 43399231 (+) |
| G2031899 | NA | non-coding | downstream | 309044 | 43479262 ~ 43480390 (+) |
| G2031390 | NA | other | upstream | 482719 | 42685638 ~ 42687128 (+) |
| G2031381 | LOC106562638 | other | upstream | 515351 | 42651759 ~ 42654496 (+) |
| G2031110 | NA | other | upstream | 849446 | 42319310 ~ 42320401 (+) |
| LOC110526920 | scg3 | other | upstream | 1447466 | 41688562 ~ 41722381 (+) |
| G2032117 | NA | other | downstream | 368772 | 43538990 ~ 43539362 (+) |
| LOC110506879 | LOC106587845 | other | downstream | 606369 | 43774037 ~ 43777549 (+) |
| G2033013 | NA | other | downstream | 1460257 | 44630475 ~ 44630763 (+) |
| LOC110516695 | LOC106562481 | other | downstream | 1792852 | 44963034 ~ 44971924 (+) |
| G2033166 | NA | other | downstream | 1802674 | 44972892 ~ 44973711 (+) |
