Gene
RNA
| Item | Value |
|---|---|
| gene id | G2031972 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 43176713 ~ 43177066 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| E3 ubiquitin-protein ligase MARCH3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2324290 | True | 354 | lncRNA | 0.54 | 1 | 43176713 | 43177066 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944425 | LOC106562717 | coding | downstream | 13701 | 43161768 ~ 43163012 (-) |
| LOC110526985 | LOC106592271 | coding | downstream | 189431 | 42964294 ~ 42987282 (-) |
| LOC110526700 | LOC106587711 | coding | downstream | 222009 | 42940157 ~ 42954704 (-) |
| LOC110526696 | LOC106562729 | coding | downstream | 259888 | 42906669 ~ 42916825 (-) |
| LOC110526693 | LOC106587688 | coding | downstream | 407462 | 42745514 ~ 42769251 (-) |
| LOC110506858 | LOC106562715 | coding | upstream | 2941 | 43180007 ~ 43198177 (-) |
| LOC110506867 | LOC106587795 | coding | upstream | 251592 | 43428658 ~ 43439196 (-) |
| LOC118944426 | NA | coding | upstream | 603864 | 43780930 ~ 43792853 (-) |
| LOC110526988 | LOC106587743 | coding | upstream | 718949 | 43896015 ~ 43949012 (-) |
| LOC110526712 | mesd1 | coding | upstream | 820659 | 43997725 ~ 44001493 (-) |
| G2031969 | NA | non-coding | downstream | 2524 | 43173929 ~ 43174189 (-) |
| G2031965 | NA | non-coding | downstream | 5808 | 43170672 ~ 43170905 (-) |
| G2031963 | NA | non-coding | downstream | 6277 | 43170138 ~ 43170436 (-) |
| G2031961 | NA | non-coding | downstream | 15816 | 43160474 ~ 43160897 (-) |
| G2031957 | NA | non-coding | downstream | 23495 | 43150981 ~ 43153218 (-) |
| G2031978 | NA | non-coding | upstream | 18657 | 43195723 ~ 43196866 (-) |
| G2031983 | NA | non-coding | upstream | 28594 | 43205660 ~ 43205874 (-) |
| G2032041 | LOC106591065 | non-coding | upstream | 215244 | 43392310 ~ 43392543 (-) |
| G2032044 | NA | non-coding | upstream | 230433 | 43407499 ~ 43407759 (-) |
| G2032045 | NA | non-coding | upstream | 232589 | 43409655 ~ 43410059 (-) |
| LOC110513924 | rasl12 | other | downstream | 555167 | 42616181 ~ 42958849 (-) |
| G2031343 | NA | other | downstream | 617810 | 42557797 ~ 42558903 (-) |
| G2031286 | LOC106562727 | other | downstream | 715398 | 42459257 ~ 42461315 (-) |
| G2031259 | NA | other | downstream | 806804 | 42368254 ~ 42369909 (-) |
| G2031225 | NA | other | downstream | 829988 | 42343282 ~ 42346725 (-) |
| G2031974 | NA | other | upstream | 7570 | 43184636 ~ 43185724 (-) |
| G2032150 | NA | other | upstream | 392094 | 43569160 ~ 43570054 (-) |
| G2032544 | tmc3 | other | upstream | 702127 | 43879193 ~ 43881732 (-) |
