G2032182


Basic Information

Item Value
gene id G2032182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 43623917 ~ 43624935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2324530
ggaacaaaacaagaaaaacaagtagcgtacagacatggaacaaaacaagaaacacaagtataGTACAGAcatggaaaaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaacacaagtagcgtacagacatggaacaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaaaacaagtagcgtacagacatggaacaaaacaagaaacacaagtataGTACAGAcatggaaaaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaacacaagtagcgtacagacatggaacaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaacacaagtagcgtacagacatggaacaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaacacaagtagcgtacagacatggaacaaaacaagaaacacaagtagagtacagacatggaacaaaacaagaaacaagtagagtacagacatggaacaaaacaagaaacacaagtagcgtacagacatggaacaaaacaagaaacaagtagagtacagacatggaacaaaacaagaaacacaagtagcgtacagacatggaacaaaacaagaaaaacaagtagcggaagggaaggggatggagtccagg

Function

NR:

description
proline-rich extensin-like protein EPR1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2324530 True 731 lncRNA 0.37 2 43623917 43624935
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110506869 mex3b coding upstream 26377 43592888 ~ 43597540 (+)
LOC118944556 NA coding upstream 56390 43559380 ~ 43567527 (+)
LOC110515557 efl1 coding upstream 88611 43439260 ~ 43535306 (+)
LOC110506863 LOC106594052 coding upstream 198054 43209258 ~ 43425863 (+)
LOC110506077 LOC106562716 coding upstream 444015 43170678 ~ 43179902 (+)
LOC110506879 LOC106587845 coding downstream 149115 43774037 ~ 43777549 (+)
LOC110526986 tmc3 coding downstream 204714 43829649 ~ 43879738 (+)
LOC110506886 star5 coding downstream 258988 43883923 ~ 43895635 (+)
LOC110526713 mesdc2 coding downstream 382631 44007566 ~ 44015263 (+)
LOC118944413 NA coding downstream 818520 44443455 ~ 44443884 (+)
G2032179 NA non-coding upstream 5100 43618613 ~ 43618817 (+)
G2032153 NA non-coding upstream 48352 43575252 ~ 43575565 (+)
G2032135 NA non-coding upstream 69141 43554504 ~ 43554776 (+)
G2031915 NA non-coding upstream 104898 43518347 ~ 43519019 (+)
G2031899 NA non-coding upstream 143527 43479262 ~ 43480390 (+)
G2032193 NA non-coding downstream 14614 43639549 ~ 43639785 (+)
G2032240 NA non-coding downstream 75509 43700444 ~ 43700694 (+)
G2032281 NA non-coding downstream 128907 43753842 ~ 43755027 (+)
G2032294 NA non-coding downstream 140537 43765472 ~ 43766120 (+)
G2032117 NA other upstream 84555 43538990 ~ 43539362 (+)
G2031390 NA other upstream 936789 42685638 ~ 42687128 (+)
spg21 spg21 other upstream 942532 42674297 ~ 42681389 (+)
G2031381 LOC106562638 other upstream 969421 42651759 ~ 42654496 (+)
G2031110 NA other upstream 1303516 42319310 ~ 42320401 (+)
G2033013 NA other downstream 1005540 44630475 ~ 44630763 (+)
LOC110516695 LOC106562481 other downstream 1338135 44963034 ~ 44971924 (+)
G2033166 NA other downstream 1347957 44972892 ~ 44973711 (+)
LOC110506180 lrrk1 other downstream 1447172 45041116 ~ 45184806 (+)

Expression

G2032182 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G2032182 Expression in each Bioproject

Bar chart with 7 bars.
G2032182 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network