G2032552


Basic Information

Item Value
gene id G2032552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 43892424 ~ 43895606 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2324950
TGGTGAAACACAAAACCTGCTGGGTGGAACATACAGTACAGTCCTACGGTACAGTAGAGTGCAGGTCAGGATTAGGGTCGCAAAATTGTGGTAGCTCTCCCCAATTTCCCAGAAATCCTGTTTGGAGGATTTCCAGATTCCCTGCGTATTCCCTACTGATTCCAGAAATCCTGTTTGGAGGATTTCCAGATTCCCTGCGTATTCCCTACTGATTCCAGAAATCCTGTTTGGAGGGTTTCCTACTGATTCCAGGAATCTGCCAACTGGGATTTCAGGAAAATTTTGAACATTTTTGAAAAATTACCAGAATTCATAACCCTAATCCTGACCtaaaaaaacatgttattttcCTGTGTTGCTTTTATTGACAACTGAACTCATAGTATATTTCAATAGCAGCTATTTTCCATAGCAGCTGTGCTTTCCAATCAGGAGCTGAGGACAACAAACGGCATTCAAAACATACACATCTGTCCCAAAACGCATGATGgagtacattttaaaaacaagccaCCAGTAGACAATGTGTTCTCTGACATTAAAACAGCAATACACTGTAGGTAGGTATGATCTTCAGGCTCCACTTACAGTACAATAACACACATCAAAACAATGCCTTCATAGTATTACACCAACAAAAGGCAAACAATGATTTTAAAAAAGCAAGCATATAGGTTGTGGATGAGGTGGAATGCAATGCACTTGTAAAGGTTTGTCAGTTAAGGTTATTATCCACTCGGGATAAGAAAAGGACGTTAAGTAGTGTGTTTTCATTTCAAAAGGAAACTTAACCACAAAGCTTCTAAAAAGATTGATCTAAAACATCATTAGTATGATGGCTTATCATCATACATGTAGAGGAACCTTCTAGACACCTTCTCTCAATACTCTGAGGAGGCTTCCTCTCCCCCTAATAGGGCTGTATCTCAAAACTCTGAAGAGGCTTCCTCAACCAACTAGGGATATATCTCACTACTATTCATGCTTGCTCTCATTGTTTCCCTTCACTGATGATTTTTTTAAAAGCTACGGAGACGCACCCTGGCCTAGACAGATGACCATACCCTCTTGTGCCATAACAAAGACAGTGGTTTTCTCAATTCTATGCTGGTAATACATTTCTTTACAGTGTAAAATGACACACTAGTCACAACTGATGCCATGTGGCAGTCCTATGCTGCTGCGCTTCAAAATATGTTGGAATCTATAGCTGTCCCATATGGcatcctactccctatatagtgcactaatttggaCCAGTGACTTATGGGACACGTACCCCACTGAATAAAACCCTAAATCCTTCAGAAGCTCTCCTATTTGAGGGGATGTCCCTTTGTCCATTCTTCATTAGATGAAGCTGTTCATATTGCCATTTGCCCATACATACTGCAGATAACTTTGCTTAAGAATAATGCAGTGTTCTTAGTATTCACATCTACATAGAGAAAAGTAACTGAGGCAGGAATCCTTGCTTGGAGGTTAGGCGTCTATAAAGCGGGCAGATGTTAAGGTAAGGAACAGGATAGAGtttagaggggggggggacatctGCCGGCTGTATATACACCCTCTAAAGGTTACtggttaaagctggaatcctcAACAGTAAAACAACCATGTTCATAATGCTTTCcagttactgcaaacaacaaacACGGTTATTTCCATCTCTGACATCATCGCACTGCACGATAGAAGAGCACAATATGTACTGCATTTCATAACCATGCTGCACGACGCTCCTCAGCTcagcaacaacaataacaatgctggtggggcagccagtggcACCATTTCCCCCtactgcggattccatctttaGGTATTGGTTAAAGGGCTGTGGAGACAGGTTAAACCAGAACACTTCAAGTACAGTACTACCGTATACAAAGGACAACAAAAAATGAGGTATGACTCATCCCAATGGAATCCGATTCCATTCTGGGGTTCCTGTAAGGTCCATGCAACATGCATGGTACTGTAGGTAGGATGCAGCCAGTGTAACAGAATGGACTGTATTCAACAGCAACAGTACAAAAGGGAAGGAGGACATATCCTCCGTGTGTTTAGGACACTAAATACAAAATATAGATTTCAAATCTATTCTCATTCTTTTGtggtgggaaaagggggggaAATGCATCACTAAATAGGAAATGTACAGGGAATATTTGTTTTGGAAGTAGAGTTTGGCAAAATTGACTTCTCTAGATCTAGTCTTAAAGGTGCGGCCCAGAGTGCTTTTTCCAGGGTTGAATGAAATTAGAACAGACACTCAACCTTTTTGTAAGACTACACTAGTGGCCACCATACCTGGTCCAAGAGAGCAACAGTACCAGGGGTGCAGGCTTTTTGTAAGACTACACTAGTGGCCACCATACCTGGTCCAAGAGAGCAACAGTACCAGGGGTGCAGGCTTTTTGctccagcactaacacaccatTATTACACAAATGAACCAAGACCTCAACGACCTGAAATCAGCTGTGTTAGTGCTGGGACAAACAAGCTGCACACTTCCTTCCCTCATATCATCCAATATCATCTCCCTTTAAGCTCAGATACAGTTTGCTCCAAGGCCAGGTGACCACTCTTTTAAAGAGGCTGTACAGAAATTGAGTTGCTAATTGTTTATCTACATTTTTGGCTTGAGTGTTGCCTGTATGGTTgatataaaatatttatttactCATGAAACAACACAATCCTTATTTTTAGTCTAGAAAGATATGGCCTGGGGAGGTGTGCCCCATGCTCTCAAATAAGGATTTTTCAAATCAATCTGTCCCTTTCAGTTAAAAAGCCCCCTGAGGTGAAAAGTTCCATATAGCCTCTTTAAAACTAAACCATTCACATAGCTAATCATTGTGTTTTTTGGTCCCGCTGAatgctggtcccagatctgagtATCACCTGGTGCCAGGAGTTGGTTatgcagcacaaacagatctgggaccagggctaAGGGAAGGTATAGTATGAGTGTATCAGTGGTCCTTGAGGGACTTGATGGCCTTGGCCAGGTTGCTGTAGAACTCCACCATGCTGGATGGGAAGAAAGAGTCGACCACGGAGCGAGGCAGGAAGCCCCCCAGGTCCGTCTGGAAGAAACTGAACAGCTGGGTTTTGTTTGGCT

Function

NR:

description
stAR-related lipid transfer protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2324950 True 3139 lncRNA 0.42 2 43892424 43895606

Neighbor

gene id symbol gene type direction distance location
LOC118944426 NA coding downstream 99571 43780930 ~ 43792853 (-)
LOC110506867 LOC106587795 coding downstream 453228 43428658 ~ 43439196 (-)
LOC110506858 LOC106562715 coding downstream 694247 43180007 ~ 43198177 (-)
LOC118944425 LOC106562717 coding downstream 729412 43161768 ~ 43163012 (-)
LOC110526985 LOC106592271 coding downstream 905142 42964294 ~ 42987282 (-)
LOC110526988 LOC106587743 coding upstream 409 43896015 ~ 43949012 (-)
LOC110526712 mesd1 coding upstream 102119 43997725 ~ 44001493 (-)
LOC110526709 cemip coding upstream 121417 44017023 ~ 44183848 (-)
LOC110526990 NA coding upstream 240117 44135723 ~ 44137626 (-)
LOC110506889 LOC106562647 coding upstream 302864 44198470 ~ 44231491 (-)
G2032550 NA non-coding downstream 645 43889134 ~ 43891779 (-)
G2032549 NA non-coding downstream 5088 43886873 ~ 43887336 (-)
G2032546 NA non-coding downstream 8670 43883462 ~ 43883754 (-)
G2032545 NA non-coding downstream 9028 43882317 ~ 43883396 (-)
G2032543 tmc3 non-coding downstream 13585 43878589 ~ 43878839 (-)
G2032558 NA non-coding upstream 23753 43919359 ~ 43919667 (-)
G2032561 NA non-coding upstream 30191 43925797 ~ 43926019 (-)
G2032586 NA non-coding upstream 69399 43965005 ~ 43969942 (-)
G2032595 NA non-coding upstream 89701 43985307 ~ 43988402 (-)
G2032544 tmc3 other downstream 10692 43879193 ~ 43881732 (-)
G2032150 NA other downstream 322370 43569160 ~ 43570054 (-)
G2031974 NA other downstream 706700 43184636 ~ 43185724 (-)
LOC110513924 rasl12 other downstream 1270878 42616181 ~ 42958849 (-)
LOC110506903 LOC106562480 other upstream 958247 44705368 ~ 44923032 (-)
LOC110506178 cers3 other upstream 1043632 44932382 ~ 44956996 (-)
LOC110506182 tecta other upstream 1443491 45338567 ~ 45358724 (-)
LOC110511667 kiaa1549l other upstream 1688152 45501084 ~ 45647805 (-)

Expression


Co-expression Network