Gene
RNA
| Item | Value |
|---|---|
| gene id | G2032992 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 44594703 ~ 44595223 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2325485 | True | 521 | lncRNA | 0.37 | 1 | 44594703 | 44595223 |
44,593,200
44,593,600
44,594,000
44,594,400
44,594,800
44,595,200
44,595,600
44,595,600
44,596,000
44,596,400
44,596,800
44,597,200
44,597,600
44,598,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944545 | NA | coding | upstream | 30349 | 44547812 ~ 44564354 (+) |
| LOC110506892 | mthfs | coding | upstream | 63584 | 44519885 ~ 44534056 (+) |
| LOC110506890 | LOC106562659 | coding | upstream | 120442 | 44469142 ~ 44474261 (+) |
| LOC110506873 | LOC106562659 | coding | upstream | 134772 | 44457451 ~ 44459931 (+) |
| LOC118944413 | NA | coding | upstream | 150819 | 44443455 ~ 44443884 (+) |
| LOC110516695 | LOC106562481 | coding | downstream | 367811 | 44963034 ~ 44971924 (+) |
| LOC110506179 | LOC106562593 | coding | downstream | 407946 | 45003169 ~ 45037201 (+) |
| LOC110506180 | lrrk1 | coding | downstream | 445893 | 45041116 ~ 45184806 (+) |
| trnaa-ugc-185 | NA | coding | downstream | 696613 | 45291836 ~ 45291908 (+) |
| LOC110506916 | snrpa1 | coding | downstream | 719973 | 45315196 ~ 45318427 (+) |
| G2032988 | NA | non-coding | upstream | 2769 | 44591684 ~ 44591934 (+) |
| G2032984 | NA | non-coding | upstream | 5786 | 44588710 ~ 44588917 (+) |
| G2032979 | NA | non-coding | upstream | 9189 | 44584986 ~ 44585514 (+) |
| G2032973 | NA | non-coding | upstream | 13144 | 44581278 ~ 44581559 (+) |
| G2032972 | NA | non-coding | upstream | 13561 | 44580686 ~ 44581142 (+) |
| G2032994 | NA | non-coding | downstream | 803 | 44596026 ~ 44599014 (+) |
| G2032995 | NA | non-coding | downstream | 4824 | 44600047 ~ 44600362 (+) |
| G2033010 | NA | non-coding | downstream | 29990 | 44625213 ~ 44625592 (+) |
| G2033012 | NA | non-coding | downstream | 33782 | 44629005 ~ 44629227 (+) |
| G2033019 | NA | non-coding | downstream | 45142 | 44640365 ~ 44640572 (+) |
| LOC110506879 | LOC106587845 | other | upstream | 817694 | 43774037 ~ 43777549 (+) |
| G2032117 | NA | other | upstream | 1055341 | 43538990 ~ 43539362 (+) |
| G2031390 | NA | other | upstream | 1907575 | 42685638 ~ 42687128 (+) |
| spg21 | spg21 | other | upstream | 1913318 | 42674297 ~ 42681389 (+) |
| G2031381 | LOC106562638 | other | upstream | 1940207 | 42651759 ~ 42654496 (+) |
| G2033013 | NA | other | downstream | 35252 | 44630475 ~ 44630763 (+) |
| G2033166 | NA | other | downstream | 377669 | 44972892 ~ 44973711 (+) |
| G2033431 | NA | other | downstream | 667092 | 45262315 ~ 45262538 (+) |
