G2033161


Basic Information

Item Value
gene id G2033161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 44975398 ~ 44976030 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2325680
gattcccctctaatcagggactgatttagacctgggacaccaggtgggtgattaccctctaatcagggactgatttagacctgggacaccaggtgggtgattaccctctaatcagggactgatttagacctgggacaccaggtgggtgattaccctctaatcagggactgatttagacctgggacaccaggtgggtgattaccctttaatcagggactgatttagacctgggacaccaggtgggtgattaccctctaatcagggactgatttagacctgggacaccaggtgggtgattcccatCTAATCAGGgattgatttagacctgggacaccaggtggggtattcccctctaatcagggactgatttagacctgggacaccaggtgggtgcaatgaattatcaggtagatcagaaaaccagcaggctcttgacatcgtagggtcagagttgaatacccTGGTCTATGGGATCTGACCAGGAAGATACCTAAAGCCCCACCGAGTTCTTCCCAGTCAGGAGAAACTACTGGTCCCTCCTATGTAGCTCTCTAATGGATATGTCTTCCACAACATCAACTACTGAATGTACATAATATGCAGAtttgtaaatgtaaaaatgtgtgaaTAAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2325680 True 633 lncRNA 0.48 1 44975398 44976030
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516695 LOC106562481 coding upstream 3474 44963034 ~ 44971924 (+)
LOC118944545 NA coding upstream 411044 44547812 ~ 44564354 (+)
LOC110506892 mthfs coding upstream 444279 44519885 ~ 44534056 (+)
LOC110506890 LOC106562659 coding upstream 501137 44469142 ~ 44474261 (+)
LOC110506873 LOC106562659 coding upstream 515467 44457451 ~ 44459931 (+)
LOC110506179 LOC106562593 coding downstream 27139 45003169 ~ 45037201 (+)
LOC110506180 lrrk1 coding downstream 65086 45041116 ~ 45184806 (+)
trnaa-ugc-185 NA coding downstream 315806 45291836 ~ 45291908 (+)
LOC110506916 snrpa1 coding downstream 339166 45315196 ~ 45318427 (+)
LOC110506920 LOC106593804 coding downstream 356748 45332778 ~ 45334899 (+)
G2033164 NA non-coding upstream 596 44973993 ~ 44974802 (+)
G2033195 LOC106562482 non-coding upstream 12552 44962183 ~ 44962846 (+)
G2033176 NA non-coding upstream 42031 44930517 ~ 44933367 (+)
G2033135 NA non-coding upstream 138981 44831258 ~ 44836417 (+)
G2033198 NA non-coding downstream 2955 44978985 ~ 44979205 (+)
G2033207 NA non-coding downstream 16183 44992213 ~ 44992722 (+)
G2033350 NA non-coding downstream 61419 45037449 ~ 45037889 (+)
G2033365 NA non-coding downstream 87726 45063756 ~ 45064378 (+)
G2033166 NA other upstream 1687 44972892 ~ 44973711 (+)
G2033013 NA other upstream 344635 44630475 ~ 44630763 (+)
LOC110506879 LOC106587845 other upstream 1198389 43774037 ~ 43777549 (+)
G2032117 NA other upstream 1436036 43538990 ~ 43539362 (+)
G2033431 NA other downstream 286285 45262315 ~ 45262538 (+)
G2033449 LOC106562599 other downstream 314915 45290945 ~ 45291714 (+)
G2033438 NA other downstream 404301 45380331 ~ 45381376 (+)
LOC110506186 LOC106562741 other downstream 435165 45411161 ~ 45474992 (+)

Expression

G2033161 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G2033161 Expression in each Bioproject

Bar chart with 21 bars.
G2033161 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network