G2033481


Basic Information

Item Value
gene id G2033481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 45404856 ~ 45405623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2326061
TTCATATAATTCATCCCCTGTGCAATTAATGAAGGGATGTAtcctcctaacacacacacacagacacgcatgcacacacacttcctTATGCAACATGTGTTGTGAGACACCTCTGTATGCCTTTTCCATCCGTCCGTCCGTTCACCCCCAGTCTGTTTTTTTAGGTGATTGATTCCCCTGAGGTTAACTGTCCTCTTGGGGTCAGACTACAGTAGGTTGATAAGACGGTGAAAGGTGAGTGTTCAGCTAATACTTTAACTGGATTTCACAGCTAAGGCTAAttattacacaacacacacacacacacacacaccatttttgttcagtgtcgcTGCTAAATGTGAATGTGGGATCTAATGACTACTTCACATTTGTTTTTCTGGAATGTAAAGTTGCAGGCTTTGTCTTGTTCATGTATCAGTGAGCACAGGTATGAGTTACACCGTGACCTGGGACACACACCTGAAGTTAATTCAATCCACTAAGTCAATTAATATATTAACTACAGGCAAACACTCTGAAACACATATACAAAGTGCTTGTTTAGGCTATTCAGTCATCTCAAATTGTTTAATGAATGAATACACTCAATTAATCCTAGCTATTTACCCACATACCAGGTCATTGGCATGTGGTATTCAGTGTTTAATGAATATATCCATATGCTTCAACATGAATCTACTCAGGTCGCTCTTGCAAAATAGATGTATTCCAATGAGACTGTCCTGGATTTAAactaaggttgaataaataccaAGCAAATGAAAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2326061 True 768 lncRNA 0.39 1 45404856 45405623
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110506183 LOC106591450 coding upstream 6470 45394130 ~ 45398386 (+)
LOC118944427 NA coding upstream 15676 45388030 ~ 45389180 (+)
LOC110506922 LOC106562745 coding upstream 29563 45370907 ~ 45375293 (+)
LOC110506920 LOC106593804 coding upstream 69957 45332778 ~ 45334899 (+)
LOC110506916 snrpa1 coding upstream 86429 45315196 ~ 45318427 (+)
LOC110506185 NA coding downstream 1041 45406664 ~ 45410753 (+)
LOC110506186 LOC106562741 coding downstream 5538 45411161 ~ 45474992 (+)
LOC118944462 NA coding downstream 92528 45498151 ~ 45498642 (+)
LOC100301705 cstf3 coding downstream 342404 45748027 ~ 45749737 (+)
LOC118936274 LOC106587831 coding downstream 456682 45862305 ~ 45884436 (+)
G2033475 LOC100194703 non-coding upstream 3594 45399049 ~ 45401262 (+)
G2033501 NA non-coding upstream 12119 45392499 ~ 45392737 (+)
G2033497 NA non-coding upstream 26060 45378527 ~ 45378796 (+)
G2033493 NA non-coding upstream 26385 45376621 ~ 45378471 (+)
G2033492 NA non-coding upstream 40722 45363827 ~ 45364134 (+)
G2033510 NA non-coding downstream 46152 45451775 ~ 45452311 (+)
G2033511 NA non-coding downstream 46872 45452495 ~ 45452789 (+)
G2033512 NA non-coding downstream 71172 45476795 ~ 45495647 (+)
G2033438 NA other upstream 23480 45380331 ~ 45381376 (+)
G2033449 LOC106562599 other upstream 113142 45290945 ~ 45291714 (+)
G2033431 NA other upstream 142318 45262315 ~ 45262538 (+)
LOC110506180 lrrk1 other upstream 309188 45041116 ~ 45184806 (+)
G2033166 NA other upstream 431145 44972892 ~ 44973711 (+)
G2033565 LOC106562738 other downstream 265496 45671119 ~ 45671855 (+)
LOC110526729 pax6 other downstream 561828 45948406 ~ 45973284 (+)
G2034095 NA other downstream 573227 45978850 ~ 45979380 (+)
G2034109 NA other downstream 611886 46017509 ~ 46018371 (+)

Expression

G2033481 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G2033481 Expression in each Bioproject

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G2033481 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network