G2036102 (LOC106562708)


Basic Information

Item Value
gene id G2036102
gene name LOC106562708
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 48225737 ~ 48227597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2329222
TGTTGGGAAACTGGTCGGTCGGGGGAAAACCTGATCCAACATTCAGAATTCATAAAGACTCTCCTCCAAAAAGAGTCTTTATAAATTAGACTCATATCATCCTCCATCTAGTATTTACAGTATGGTTTCAGTCAGCTAGTTCTTCAGCCATCCCAAAACACAGGTCAACATTACAGGGGAGACTAGTGAAGGAATAAAGTGTGGGAACAAAGCTATTCAATAAACCCACTCAAGACATTCTTCTTCTGTAGCTTCCTGATGAGTGAAGAGacaaatgggggtgggggggggggcaccctTTTTCtcccatacacacagacacactccctgAAGCTACGTTTGCACATAATTACAACAGCTAGCTCGGAATAGACCACAGCTGCAATTACAGTGGCAAAAATAAGACCCGGGACGAACGGCACCGCAAACATTCAGCGCTTTTCGACTGAACACACCTTTCACCTTCTCTGTAACCAGATCACACACACGTAGCTACGTAGGCTACACACACTTAGCTACGtaggctacacacacagagagatgtgcacacacacacgtagctaCGTAGGCTACACACACATGTAGCTACGtaggctacacacacagagagatgtgcacacacacacgtagctacgtaggctacacacacagagagatgtgcacacacacatgtagctacgtaggctacacacacagagagatgtgcacacacacacatagctacgtaggctatacacacagagagatgtgcacacacacacacatgtagctacgtaggctacacacacagagagatgtgcacacacacacatagctacgtaggctatacacacagagagatgtgcacacacacacatgtagctacgtaggctacacacacagagagatgtgcacacacacacatagctacgtaggctacacacacagagagatgtgcacacacacataccacccgcTTCCCTCCCACACCTCCCCATAGAGTTCATGGTCCAGGACCGGCTCCTAGTTGTGCTTGGCCCGCCCCCCCTTCAGGTAGCTCTTCCAGCGCTTCACCACATCCCGGAAGATGGGCGCGTTATCGATGGACGCCAGCAGCTGCAGCTGGTTGATGTGCGTGGTGTGGTAGTCCCAGCGTGCCAGGTTGGGGGCTGTGCCCAGCATGTAGTGCCGCAGGTCGTAGATGCTGCCCGAGCCCGTGTCATACAGTGGCAGCATGGCCTTGAGGGACTCCATGCCCCTGGAGAACAACAGGCCAGACTCCCGGCCTAGTTTCTCGCCCGCCGTCTCGGCCAGATCGTGGAGACCGAGCAGCGAGTATATGAAGCCGTTGAGCACGAAGGAGCCTGGTGTAGTGGGGTACTCCTCGTACCAGTCGTACTTGTTCATGAAGACAGCCTTGACGCCGTGCTGTTCAGAGTGCAGCTTGTAGGGGCCGGTGGCACGCAGCGCAGCGTTCAGGTACGTCTGGTCCTTGGTGAGCAGGTAGGCGCGGACCAGAGTCGACATGGCCTGGCCCTGCGCCATGGCGGAGTACCAGCCAGGCTCCAGCGGGCGGAAGCCCTCGCCCAGCTTGCGTGTGACCATGATGGGCCATCCG
>TU2329225
TGTTGGGAAACTGGTCGGTCGGGGGAAAACCTGATCCAACATTCAGAATTCATAAAGACTCTCCTCCAAAAAGAGTCTTTATAAATTAGACTCATATCATCCTCCATCTAGTATTTACAGTATGGTTTCAGTCAGCTAGTTCTTCAGCCATCCCAAAACACAGGTCAACATTACAGGGGAGACTAGTGAAGGAATAAAGTGTGGGAACAAAGCTATTCAATAAACCCACTCAAGACATTCTTCTTCTGTAGCTTCCTGATGAGTGAAGAGacaaatgggggtgggggggggggcaccctTTTTCtcccatacacacagacacactccctgAAGCTACGTTTGCACATAATTACAACAGCTAGCTCGGAATAGACCACAGCTGCAATTACAGTGGCAAAAATAAGACCCGGGACGAACGGCACCGCAAACATTCAGCGCTTTTCGACTGAACACACCTTTCACCTTCTCTGTAACCAGATCACACACACGTAGCTACGTAGGCTACACACACTTAGCTACGtagGCTACACACACATGTAGCTACGtaggctacacacacagagagatgtgcacacacacacgtagctacgtaggctacacacacagagagatgtgcacacacacatgtagctacgtaggctacacacacagagagatgtgcacacacacacatagctacgtaggctatacacacagagagatgtgcacacacacacacatgtagctacgtaggctacacacacagagagatgtgcacacacacacatagctacgtaggctatacacacagagagatgtgcacacacacacatgtagctacgtaggctacacacacagagagatgtgcacacacacacatagctacgtaggctacacacacagagagatgtgcacacacacataccacccgcTTCCCTCCCACACCTCCCCATAGAGTTCATGGTCCAGGACCGGCTCCTAGTTGTGCTTGGCCCGCCCCCCCTTCAGGTAGCTCTTCCAGCGCTTCACCACATCCCGGAAGATGGGCGCGTTATCGATGGACGCCAGCAGCTGCAGCTGGTTGATGTGCGTGGTGTGGTAGTCCCAGCGTGCCAGGTTGGGGGCTGTGCCCAGCATGTAGTGCCGCAGGTCGTAGATGCTGCCCGAGCCCGTGTCATACAGTGGCAGCATGGCCTTGAGGGACTCCATGCCCCTGGAGAACAACAGGCCAGACTCCCGGCCTAGTTTCTCGCCCGCCGTCTCGGCCAGATCGTGGAGACCGAGCAGCGAGTATATGAAGCCGTTGAGCACGAAGGAGCCTGGTGTAGTGGGGTACTCCTCGTACCAGTCGTACTTGTTCATGAAGACAGCCTTGACGCCGTGCTGTTCAGAGTGCAGCTTGTAGGGGCCGGTGGCACGCAGCGCAGCGTTCAGGTACGTCTGGTCCTTGGTGAGCAGGTAGGCGCGGACCAGAGTCGACATGGCCTGGCCCTGCGCCATGGCGGAGTACCAGCCAGGCTCCAGCGGGCGGAAGCCCTCGCCCAGCTTGCGTGTGACCATGATGGGCCATCCG

Function

NR:

description
D-glucuronyl C5-epimerase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2329222 False 1597 TUCP 0.53 2 48225737 48227597
TU2329225 True 1552 TUCP 0.54 3 48225737 48227597
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110518410 LOC106562701 coding downstream 109230 48110914 ~ 48116507 (-)
LOC110520392 LOC106562707 coding downstream 232594 47896701 ~ 47993143 (-)
LOC110511870 NA coding downstream 335552 47888685 ~ 47890185 (-)
LOC110526754 LOC106562769 coding downstream 370751 47846318 ~ 47854986 (-)
LOC118944415 call4 coding downstream 379718 47838252 ~ 47846019 (-)
LOC110487445 tle3 coding upstream 335280 48562877 ~ 48618892 (-)
LOC118944539 LOC106587861 coding upstream 584199 48811796 ~ 48893711 (-)
mo4l1 mo4l1 coding upstream 684041 48911638 ~ 48925033 (-)
LOC110526784 LOC106562667 coding upstream 698868 48926465 ~ 48928519 (-)
LOC110527003 LOC105013624 coding upstream 709445 48937042 ~ 49046675 (-)
G2035997 NA non-coding downstream 218591 48006909 ~ 48007146 (-)
G2035960 NA non-coding downstream 331354 47893022 ~ 47894383 (-)
G2035959 NA non-coding downstream 332773 47892634 ~ 47892964 (-)
G2035928 NA non-coding downstream 390084 47835370 ~ 47835653 (-)
G2036101 NA non-coding upstream 446 48228043 ~ 48230868 (-)
G2036108 NA non-coding upstream 6869 48234466 ~ 48234770 (-)
G2036111 NA non-coding upstream 12975 48240572 ~ 48240971 (-)
G2035942 NA non-coding upstream 24660 48252257 ~ 48253180 (-)
G2036125 NA non-coding upstream 41209 48268806 ~ 48271794 (-)
trip4 trip4 other downstream 646623 47504873 ~ 47579187 (-)
LOC110506956 LOC106562712 other downstream 1107577 47100651 ~ 47118376 (-)
G2034880 NA other downstream 1395116 46830334 ~ 46830621 (-)
LOC118936480 NA other downstream 1627222 46590380 ~ 46598515 (-)
G2034536 NA other downstream 1944790 46276077 ~ 46280947 (-)
smad3 smad3 other upstream 1089431 49317028 ~ 49341509 (-)
LOC110513834 chst1 other upstream 1389282 49615631 ~ 49620267 (-)
G2037622 LOC106562569 other upstream 1711924 49939521 ~ 49941299 (-)
G2037650 NA other upstream 1752204 49979801 ~ 49980676 (-)

Expression

G2036102(LOC106562708) Expression in all Baseline Samples

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G2036102(LOC106562708) Expression in each Bioproject

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G2036102(LOC106562708) Expression in each Sample
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Co-expression Network