G2036631


Basic Information

Item Value
gene id G2036631
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 49295152 ~ 49296361 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2329840
ggggtaaaatacaaaaaaaactatttttgtaaAGTTCTAATTTTGTCAAATGCTATGGATAATCAAACCACAGTTTCAGATGTATTGAGAAATACACTGCTATGTCAAACTCCTCAGACAGTCAGAGGATATCTGGGTGACAGTTCAAATCCACAACCCAATGGTCTCGGACTGTGCGGGAAAGAGATTTGGCGCGCTTCCAAAAAGACGGATTACAAACACGATCTGCACTGTTCCGGGACAAACTAGAGAACATGGGAAACCCATTCAGAGGACTGGACAGACAGGAGAACATCGACCTCGCCTAAAAGCTTCTTACTAGATTTCCCTTTACACACTACTCAGAAGTGGCAAGGGAGGAACATATTTCATGACGACAAATTCATATATTTTCAATCAGCTAACAAATGGGCGGCATTCTACAAATTTGCAACAAAAAGACGAAAACGGAAAAAAAAACAGCTAACCATAGAAACAGTCTCCACTGAAATGTGTAAAACTTCATGTTCTTCTAGCATGCTATATAAAAAGCAGTATCACTCACCATTCCGAAACACCCAATCTAGTAATTACCTAGCAGCGCTACATAAACATATGTACAACTAACAATGATAACAAAAACAGAAAAGAAAAATGGAGGAATCTCATGCCTTAAAATCTCCCATGCTACAGCGGTGTTGGCACTAGATGCCGACATATTAAACatgtacaataaaaaaaaatgtctatgACATAGAGGCGATAACAACGCCTTCCTGTTTTAATGCACACGCCCCCTTTTGCCACAAACATGtacaaaaaaaaacggaaaaaaagTGCTGTCAGTTGGTGTGGATGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGATGGGGAGAGCATGTGACAGACGAGGGTTGGGGAGAGCATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGATGGGGAGAGCATGTGACAGACG
>TU2329841
ggggtaaaatacaaaaaaaactatttttgtaaAGTTCTAATTTTGTCAAATGCTATGGATAATCAAACCACAGTTTCAGATGTATTGAGAAATACACTGCTATGTCAAACTCCTCAGACAGTCAGAGGATATCTGGGTGACAGTTCAAATCCACAACCCAATGGTCTCGGACTGTGCGGGAAAGAGATTTGGCGCGCTTCCAAAAAGACGGATTACAAACACGATCTGCACTGTTCCGGGACAAACTAGAGAACATGGGAAACCCATTCAGAGGACTGGACAGACAGGAGAACATCGACCTCGCCTAAAAGCTTCTTACTAGATTTCCCTTTACACACTACTCAGAAGTGGCAAGGGAGGAACATATTTCATGACGACAAATTCATATATTTTCAATCAGCTAACAAATGGGCGGCATTCTACAAATTTGCAACAAAAAGACGAAAACGGAAAAAAAAACAGCTAACCATAGAAACAGTCTCCACTGAAATGTGTAAAACTTCATGTTCTTCTAGCATGCTATATAAAAAGCAGTATCACTCACCATTCCGAAACACCCAATCTAGTAATTACCTAGCAGCGCTACATAAACATATGTACAACTAACAATGATAACAAAAACAGAAAAGAAAAATGGAGGAATCTCATGCCTTAAAATCTCCCATGCTACAGCGGTGTTGGCACTAGATGCCGACATATTAAACatgtacaataaaaaaaaatgtctatgACATAGAGGCGATAACAACGCCTTCCTGTTTTAATGCACACGCCCCCTTTTGCCACAAACATGtacaaaaaaaaacggaaaaaaagTGCTGTCAGTTGGTGTGGATGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGATGGGGAGAGCATGTGACAGACGAGGGTTGGGGAGAGCATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGATGGGGAGAGCATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAGGGTTGGGGAGAGTATGTGACAGACGAG
>TU2329842
ggggtaaaatacaaaaaaaactatttttgtaaAGTTCTAATTTTGTCAAATGCTATGGATAATCAAACCACAGTTTCAGATGTATTGAGAAATACACTGCTATGTCAAACTCCTCAGACAGTCAGAGGATATCTGGGTGACAGTTCAAATCCACAACCCAATGGTCTCGGACTGTGCGGGAAAGAGATTTGGCGCGCTTCCAAAAAGACGGATTACAAACACGATCTGCACTGTTCCGGGACAAACTAGAGAACATGGGAAACCCATTCAGAGGACTGGACAGACAGGAGAACATCGACCTCGCCTAAAAGCTTCTTACTAGATTTCCCTTTACACACTACTCAGAAGTGGCAAGGGAGGAACATATTTCATGACGACAAATTCATATATTTTCAATCAGCTAACAAATGGGCGGCATTCTACAAATTTGCAACAAAAAGACGAAAACGGAAAAAAAAACAGCTAACCATAGAAACAGTCTCCACTGAAATGTGTAAAACTTCATGTTCTTCTAGCATGCTATATAAAAAGCAGTATCACTCACCATTC
>TU2329839
AATCAAACCACAGTTTCAGATGTATTGAGAAATACACTGCTATGTCAAACTCCTCAGACAGTCAGAGGATATCTGGGTGACAGTTCAAATCCACAACCCAATGGTCTCGGACTGTGCGGGAAAGAGATTTGGCGCGCTTCCAAAAAGACGGATTACAAACACGATCTGCACTGTTCCGGGACAAACTAGAGAACATGGGAAACCCATTCAGAGGACTGGACAGACAGGAGAACATCGACCTCGCCTAAAAGCTTCTTACTAGATTTCCCTTTACACACTACTCAGAAGTGGCAAGGGAGGAACATATTTCATGACGACAAATTCATATATTTTCAATCAGCTAACAAATGGGCGGCATTCTACAAATTTGCAACAAAAAGACGAAAACGGAAAAAAAAACAGCTAACCATAGAAACAGTCTCCACTGAAATGTGTAAAACTTCATGTTCTTCTAGCATGCTATATAAAAAGCAGTATCACTCACCATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2329840 False 1154 TUCP 0.44 1 49295152 49296305
TU2329841 False 1210 TUCP 0.44 1 49295152 49296361
TU2329842 False 549 lncRNA 0.40 1 49295152 49295700
TU2329839 True 489 lncRNA 0.41 1 49295212 49295700

Neighbor

gene id symbol gene type direction distance location
LOC118944437 NA coding upstream 371840 48922297 ~ 48923312 (+)
LOC110506975 LOC106562560 coding upstream 946275 48335348 ~ 48348877 (+)
LOC110506209 LOC106595677 coding upstream 1019876 48253667 ~ 48275276 (+)
LOC110526742 LOC106595196 coding upstream 1041971 48240385 ~ 48253181 (+)
LOC110506198 glce coding upstream 1068670 48149439 ~ 48226482 (+)
LOC118944429 NA coding downstream 68129 49363829 ~ 49368336 (+)
LOC118944495 LOC106562569 coding downstream 642371 49938071 ~ 49940598 (+)
LOC118944431 NA coding downstream 653096 49948796 ~ 49951231 (+)
LOC110517837 LOC106562510 coding downstream 653458 49949158 ~ 49965507 (+)
LOC110514611 LOC106593737 coding downstream 673849 49969549 ~ 49986453 (+)
G2036630 NA non-coding upstream 311 49292579 ~ 49294841 (+)
G2036607 NA non-coding upstream 117781 49177152 ~ 49177371 (+)
G2036606 NA non-coding upstream 119278 49175675 ~ 49175874 (+)
G2036604 NA non-coding upstream 123422 49171487 ~ 49171730 (+)
G2036603 NA non-coding upstream 125675 49169261 ~ 49169477 (+)
G2036849 NA non-coding downstream 1040 49296740 ~ 49297100 (+)
G2036850 NA non-coding downstream 1792 49297492 ~ 49298071 (+)
G2036851 NA non-coding downstream 4888 49300588 ~ 49301090 (+)
G2036854 NA non-coding downstream 10854 49306554 ~ 49306762 (+)
G2036855 NA non-coding downstream 12741 49308441 ~ 49316537 (+)
G2036456 NA other upstream 453439 48840981 ~ 48841713 (+)
G2035721 NA other upstream 1064284 48228487 ~ 48230868 (+)
G2035701 NA other upstream 1188783 48104908 ~ 48106369 (+)
G2035682 NA other upstream 1233712 48059726 ~ 48061440 (+)
G2035141 LOC106562774 other upstream 1860348 47434458 ~ 47434804 (+)
G2036906 NA other downstream 60495 49356195 ~ 49356544 (+)
G2036925 LOC106563534 other downstream 105700 49401400 ~ 49403012 (+)
G2037387 NA other downstream 613356 49909056 ~ 49910516 (+)
G2037833 NA other downstream 1025222 50320922 ~ 50323439 (+)
G2037834 LOC106562711 other downstream 1032620 50328320 ~ 50329070 (+)

Expression


Co-expression Network