Gene
RNA
| Item | Value |
|---|---|
| gene id | G2037649 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 49977701 ~ 49978267 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106536431, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2331042 | True | 243 | lncRNA | 0.39 | 2 | 49977701 | 49978267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944430 | NA | coding | downstream | 297136 | 49627925 ~ 49680565 (-) |
| LOC110513834 | chst1 | coding | downstream | 357434 | 49615631 ~ 49620267 (-) |
| trnag-ucc-231 | NA | coding | downstream | 505645 | 49471985 ~ 49472056 (-) |
| LOC118936600 | LOC106563534 | coding | downstream | 548154 | 49402157 ~ 49429547 (-) |
| smad3 | smad3 | coding | downstream | 636192 | 49317028 ~ 49341509 (-) |
| LOC118944538 | LOC106587778 | coding | upstream | 49166 | 50027433 ~ 50035112 (-) |
| LOC110506214 | dh12b | coding | upstream | 301832 | 50280099 ~ 50290735 (-) |
| ttc17 | ttc17 | coding | upstream | 344304 | 50322571 ~ 50343942 (-) |
| LOC110506217 | trpm5 | coding | upstream | 396576 | 50374843 ~ 50422761 (-) |
| LOC110506218 | kcnq1 | coding | upstream | 489743 | 50468010 ~ 50530938 (-) |
| G2037602 | NA | non-coding | downstream | 66929 | 49909347 ~ 49910772 (-) |
| G2037581 | NA | non-coding | downstream | 110385 | 49865714 ~ 49867316 (-) |
| G2037335 | NA | non-coding | downstream | 161877 | 49815553 ~ 49815824 (-) |
| G2037323 | NA | non-coding | downstream | 173374 | 49803926 ~ 49804327 (-) |
| G2037309 | NA | non-coding | downstream | 190496 | 49786746 ~ 49787205 (-) |
| G2037675 | NA | non-coding | upstream | 42987 | 50021254 ~ 50025340 (-) |
| G2037673 | NA | non-coding | upstream | 63425 | 50041692 ~ 50041924 (-) |
| G2037687 | apip | non-coding | upstream | 64424 | 50042691 ~ 50048539 (-) |
| G2037694 | NA | non-coding | upstream | 87066 | 50065333 ~ 50068121 (-) |
| G2037743 | NA | non-coding | upstream | 173569 | 50151836 ~ 50154170 (-) |
| G2037622 | LOC106562569 | other | downstream | 36402 | 49939521 ~ 49941299 (-) |
| LOC110487445 | tle3 | other | downstream | 1410074 | 48562877 ~ 48618892 (-) |
| G2036102 | LOC106562708 | other | downstream | 1750104 | 48225737 ~ 48227597 (-) |
| G2037650 | NA | other | upstream | 1534 | 49979801 ~ 49980676 (-) |
| G2037925 | NA | other | upstream | 323722 | 50301989 ~ 50309277 (-) |
| LOC110526801 | LOC106593119 | other | upstream | 840582 | 50803323 ~ 50833039 (-) |
