G2037542


Basic Information

Item Value
gene id G2037542
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 50269047 ~ 50270523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2330923
AATAAAAGGCACTGATGCTAGCATACTATTTTCTAGATTAAATCCGGAATGTCGAAGATCCTCTTTGTAAAATGattgacatttaaaggtaatttccgattgagccgacatatgcagtgtttaccctGAATGTAGTCTCCGTTAActcaggaacattgcctttaaaatgttccaAACGGAAAAGGGGGAAGAGTAACATTGTTGTCTCAAAGTAACATATTGTCAATGACATACATATGAGACCAAGAGGTGCTGGATTCATTTTGGGACTCAACTTGAAGCATTTTAATCAAAAGATCCCATTGGTTCTCAAAACAGGAACTAAAAAGtaatgaaaataaatatttatttggtACGGTAAAAAAAATAACGCTACACATGTTTTCCAGGAAGCaacgcaacaacaaaaaacagttgCATCATACCAAAATATTGACGTAAACAATGATAAACAGTCAACAGGATAAAAAAAACAGCCTGTCTGCCAGAGTCCTGCCTCAGAGCCAGGCAGTAGAGTAGGGGGCAATCCTGTAGAAGTGCATAGAGGAGTCACAGGGAGGTCACGCCTCCTTTTGCTTCGGGACACAGCATCTCCTGAGAGGGCGGCCCTCACATCCTTCATGGCCACCCCTGGGTACTCCACCTCAGGCTCTCCAGGGTCTTCAGGAAGGAGCACAGGGCGTGATCCTCTTCCAGGGAcgaccctctctcctcttcctctgtgaTGTCAGAGAATGGGGGCGGGGCGTGTCTTCATCCGGAAGCGGGGTTCCTGGTGGCCCCGGCTGCAGAGCCGGACACCAGGGACCGCAGGCTGAGGGAACACCTCCGTCGCCAACGGCAACAGATGGTCGGGCAGCGTGTCCATTCTGGTGGCCAATGCACTCAAGGGGCTGCGAGGCCGGGGAGAGATCCGGTGTGGAGTTGAAAAGGTCTGGAAAATGAGTGAAGGTGATGGAGGAAATCTGGAGGGCTTTGAGCTCAATCTGAGCTCTGACAGGAAGTAAACTATGAAGCCAGGAATAATGCTATAGACTTATCTCTCTAATAAACAGCCATTTAAAAATCCCCAGGTCCAGGTTATTCCTATCTGTACTGGTATATCTACATGTTTACCTCCATCTGTCCGGGTTGCTGCTCCTGATAACAGtgtctggagggaggagAGCTTGATCTCTTCCACAGTACTACTGCTCCCTCTGGAACTCCTCTCAGTAGCTTGATCTCTTCCACAGTACTACTGCTCCCTCTCGAACTCCTCTCAGTAGCTTGATCTCTTCCACAGTGCTACTGCTCCCTCTCGAACTCCTCTCAGTAGCTTGATCTCTTCCACAGTGGTACCGCTCCCTCTGTGAGTGTCTGTGGGAGCTGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2330923 True 1374 lncRNA 0.48 2 50269047 50270523

Neighbor

gene id symbol gene type direction distance location
LOC110506980 LOC106593359 coding upstream 117324 50109946 ~ 50151723 (+)
LOC110526794 apip coding upstream 220460 50041108 ~ 50048587 (+)
LOC118944446 LOC106587903 coding upstream 248502 50008794 ~ 50020545 (+)
LOC110514611 LOC106593737 coding upstream 282594 49969549 ~ 49986453 (+)
LOC110517837 LOC106562510 coding upstream 303540 49949158 ~ 49965507 (+)
LOC110506984 LOC106562578 coding downstream 73458 50343981 ~ 50349532 (+)
LOC110506216 traf6 coding downstream 89988 50360511 ~ 50373096 (+)
LOC110506995 LOC106562863 coding downstream 170044 50440567 ~ 50446781 (+)
LOC110506997 LOC106562470 coding downstream 193102 50463625 ~ 50464821 (+)
LOC118944475 NA coding downstream 273557 50544080 ~ 50599404 (+)
G2037546 NA non-coding upstream 40917 50227455 ~ 50228130 (+)
G2037524 NA non-coding upstream 78701 50189596 ~ 50190346 (+)
G2037511 NA non-coding upstream 106663 50161491 ~ 50162384 (+)
G2037433 NA non-coding upstream 161392 50022718 ~ 50107655 (+)
G2037805 NA non-coding downstream 6283 50276806 ~ 50277233 (+)
G2037829 NA non-coding downstream 45067 50315590 ~ 50315932 (+)
G2037833 NA non-coding downstream 50605 50320922 ~ 50323439 (+)
G2037835 NA non-coding downstream 59073 50329596 ~ 50329824 (+)
G2037836 NA non-coding downstream 60664 50331187 ~ 50331802 (+)
G2037387 NA other upstream 358531 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 866035 49401400 ~ 49403012 (+)
G2036906 NA other upstream 912503 49356195 ~ 49356544 (+)
G2036631 NA other upstream 972686 49295152 ~ 49296361 (+)
G2036456 NA other upstream 1427334 48840981 ~ 48841713 (+)
G2037834 LOC106562711 other downstream 57797 50328320 ~ 50329070 (+)
LOC110527008 pex16 other downstream 526775 50744617 ~ 50803181 (+)
G2038302 NA other downstream 730228 51000751 ~ 51003835 (+)

Expression


Co-expression Network