G2037834 (LOC106562711)


Basic Information

Item Value
gene id G2037834
gene name LOC106562711
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 50328320 ~ 50329070 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2331268
TCTGTCTCTATATTACATCATGGTAGTTACTCAGGACAGGACATGTACCActcagtctcctgtctgtctctatattacATCATGGTAGTTACTCAGTACATGTACCACTcagccccctgtctgtctctatattacATCATGGTAGTTACTCAGGACAGGACATGTACCACTCAGCCTCCTATCTGTCTCTATATTACATCATGGTAGTTACTCAGTACATGACACCTACCCACTCAGCCCCCTCGTCATCCTCACAGTTCCCGAAGCATGGCCCTCCTCCGCTCCGGCCCGCTCCCATCACCCGGTCGTTCTTCAGCACACGGATGCCCCTCAGGTCGCCCCGCTTGCCCCCCACGTCCAGAGCCCCCTCGAAGGCCCCCATCAGCTCCTCCTTCAGCTGccactcctcctcatccctctctcctcctccaggctGTTGGCTTGCCTCTCCAGAGCCGTTACTGTCCAGCACCACCTCTGTTACAAACAGAAAGGCAGGgagggtcctgttcattaggtaccaaacggaagaaaacggaCAGAAACAGGGAGGGTTTAACATGACATGTGTAGTTTTTCC

Function

NR:

description
PREDICTED: tetratricopeptide repeat protein 17-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2331268 True 580 TUCP 0.53 3 50328320 50329070

Neighbor

gene id symbol gene type direction distance location
LOC110506980 LOC106593359 coding upstream 176597 50109946 ~ 50151723 (+)
LOC110526794 apip coding upstream 279733 50041108 ~ 50048587 (+)
LOC118944446 LOC106587903 coding upstream 307775 50008794 ~ 50020545 (+)
LOC110514611 LOC106593737 coding upstream 341867 49969549 ~ 49986453 (+)
LOC110517837 LOC106562510 coding upstream 362813 49949158 ~ 49965507 (+)
LOC110506984 LOC106562578 coding downstream 14911 50343981 ~ 50349532 (+)
LOC110506216 traf6 coding downstream 31441 50360511 ~ 50373096 (+)
LOC110506995 LOC106562863 coding downstream 111497 50440567 ~ 50446781 (+)
LOC110506997 LOC106562470 coding downstream 134555 50463625 ~ 50464821 (+)
LOC118944475 NA coding downstream 215010 50544080 ~ 50599404 (+)
G2037833 NA non-coding upstream 4881 50320922 ~ 50323439 (+)
G2037829 NA non-coding upstream 12388 50315590 ~ 50315932 (+)
G2037805 NA non-coding upstream 51087 50276806 ~ 50277233 (+)
G2037543 NA non-coding upstream 55423 50224842 ~ 50272897 (+)
G2037835 NA non-coding downstream 526 50329596 ~ 50329824 (+)
G2037836 NA non-coding downstream 2117 50331187 ~ 50331802 (+)
G2037837 ttc17 non-coding downstream 3205 50332275 ~ 50332572 (+)
G2037838 NA non-coding downstream 3924 50332994 ~ 50333231 (+)
G2037839 NA non-coding downstream 4800 50333870 ~ 50334181 (+)
G2037387 NA other upstream 417804 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 925308 49401400 ~ 49403012 (+)
G2036906 NA other upstream 971776 49356195 ~ 49356544 (+)
G2036631 NA other upstream 1031959 49295152 ~ 49296361 (+)
LOC110527008 pex16 other downstream 468228 50744617 ~ 50803181 (+)
G2038302 NA other downstream 671681 51000751 ~ 51003835 (+)
G2038305 NA other downstream 676562 51005632 ~ 51006168 (+)

Expression


Co-expression Network