G2037839


Basic Information

Item Value
gene id G2037839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 50333870 ~ 50334181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2331274
GTCTAACACGCTAACCCGGGGCCCAGTGTCTAACACGCTAACCCGGGGCCCAGTGTCTAACACGCTAACCCGGGGGCCAGTGTCTAACACGCTAACCCGGGGCCCAGTGTCTAACACGCTAACCTGGGGCCCAGTGTCTAACACACTAACCTGGGGCCCAGTGTCTAACACACTAACCTGGGGCCCTGTGTCTCAGGTGGGAGGTAGAAGGTGGGTAGTAGGTGGGCGGGGGGGATGACAGGAAACTCATCAGCACAGTCTGCCCTCCGAGGCCACagcagcctctgaatgtcctaCAGACAAAACACACGC

Function

NR:

description
PREDICTED: tetratricopeptide repeat protein 17

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2331274 True 312 lncRNA 0.60 1 50333870 50334181

Neighbor

gene id symbol gene type direction distance location
LOC110506980 LOC106593359 coding upstream 182147 50109946 ~ 50151723 (+)
LOC110526794 apip coding upstream 285283 50041108 ~ 50048587 (+)
LOC118944446 LOC106587903 coding upstream 313325 50008794 ~ 50020545 (+)
LOC110514611 LOC106593737 coding upstream 347417 49969549 ~ 49986453 (+)
LOC110517837 LOC106562510 coding upstream 368363 49949158 ~ 49965507 (+)
LOC110506984 LOC106562578 coding downstream 9800 50343981 ~ 50349532 (+)
LOC110506216 traf6 coding downstream 26330 50360511 ~ 50373096 (+)
LOC110506995 LOC106562863 coding downstream 106386 50440567 ~ 50446781 (+)
LOC110506997 LOC106562470 coding downstream 129444 50463625 ~ 50464821 (+)
LOC118944475 NA coding downstream 209899 50544080 ~ 50599404 (+)
G2037838 NA non-coding upstream 639 50332994 ~ 50333231 (+)
G2037837 ttc17 non-coding upstream 1298 50332275 ~ 50332572 (+)
G2037836 NA non-coding upstream 2068 50331187 ~ 50331802 (+)
G2037835 NA non-coding upstream 4046 50329596 ~ 50329824 (+)
G2037833 NA non-coding upstream 10431 50320922 ~ 50323439 (+)
G2037855 NA non-coding downstream 45544 50379725 ~ 50380446 (+)
G2037867 NA non-coding downstream 59254 50393435 ~ 50393884 (+)
G2037989 LOC106562471 non-coding downstream 134035 50468216 ~ 50471240 (+)
G2038047 NA non-coding downstream 249825 50584006 ~ 50588160 (+)
G2037834 LOC106562711 other upstream 4800 50328320 ~ 50329070 (+)
G2037387 NA other upstream 423354 49909056 ~ 49910516 (+)
G2036925 LOC106563534 other upstream 930858 49401400 ~ 49403012 (+)
G2036906 NA other upstream 977326 49356195 ~ 49356544 (+)
LOC110527008 pex16 other downstream 463117 50744617 ~ 50803181 (+)
G2038302 NA other downstream 666570 51000751 ~ 51003835 (+)
G2038305 NA other downstream 671451 51005632 ~ 51006168 (+)

Expression


Co-expression Network