Gene
RNA
| Item | Value |
|---|---|
| gene id | G2037855 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 50379725 ~ 50380446 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extensin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2331302 | True | 586 | lncRNA | 0.39 | 2 | 50379725 | 50380446 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506216 | traf6 | coding | upstream | 7982 | 50360511 ~ 50373096 (+) |
| LOC110506984 | LOC106562578 | coding | upstream | 30193 | 50343981 ~ 50349532 (+) |
| LOC110506980 | LOC106593359 | coding | upstream | 228002 | 50109946 ~ 50151723 (+) |
| LOC110526794 | apip | coding | upstream | 331138 | 50041108 ~ 50048587 (+) |
| LOC118944446 | LOC106587903 | coding | upstream | 359180 | 50008794 ~ 50020545 (+) |
| LOC110506995 | LOC106562863 | coding | downstream | 60121 | 50440567 ~ 50446781 (+) |
| LOC110506997 | LOC106562470 | coding | downstream | 83179 | 50463625 ~ 50464821 (+) |
| LOC118944475 | NA | coding | downstream | 163634 | 50544080 ~ 50599404 (+) |
| LOC110526797 | cars | coding | downstream | 369707 | 50750153 ~ 50772510 (+) |
| LOC110527008 | pex16 | coding | downstream | 411072 | 50744617 ~ 50803181 (+) |
| G2037839 | NA | non-coding | upstream | 45544 | 50333870 ~ 50334181 (+) |
| G2037838 | NA | non-coding | upstream | 46494 | 50332994 ~ 50333231 (+) |
| G2037837 | ttc17 | non-coding | upstream | 47153 | 50332275 ~ 50332572 (+) |
| G2037836 | NA | non-coding | upstream | 47923 | 50331187 ~ 50331802 (+) |
| G2037867 | NA | non-coding | downstream | 12989 | 50393435 ~ 50393884 (+) |
| G2037989 | LOC106562471 | non-coding | downstream | 87770 | 50468216 ~ 50471240 (+) |
| G2038047 | NA | non-coding | downstream | 203560 | 50584006 ~ 50588160 (+) |
| G2038054 | NA | non-coding | downstream | 221592 | 50602038 ~ 50603517 (+) |
| G2038081 | NA | non-coding | downstream | 274841 | 50655287 ~ 50656652 (+) |
| G2037834 | LOC106562711 | other | upstream | 50655 | 50328320 ~ 50329070 (+) |
| G2037833 | NA | other | upstream | 56286 | 50320922 ~ 50323439 (+) |
| G2037387 | NA | other | upstream | 469209 | 49909056 ~ 49910516 (+) |
| G2036925 | LOC106563534 | other | upstream | 976713 | 49401400 ~ 49403012 (+) |
| G2038302 | NA | other | downstream | 620305 | 51000751 ~ 51003835 (+) |
| G2038305 | NA | other | downstream | 625186 | 51005632 ~ 51006168 (+) |
