LOC118944795


Basic Information

Item Value
gene id LOC118944795
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 1653720 ~ 1653989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040112.1
GGTCGATGATGAGATGTAAAAGGTCTGATTGCCCAAGTCCCTTCCCATTGTCCCCTCTGCTCCCAGCAGCCCCTGCTCTACTCCCAGCATGCTCTAGTTGTGCATCGTTGGCCACAGGGGATgctgacagagaggatgaccTCACATCCTGTCTCTTTAAAAGACCAAGGTGTCACAGTGATGATGGACATCCAACATGACCAATCACCAAGGAGTGTGGGGTTGTGGGATTGGGATAGGTAGATGATCTCAAGTTTTCAAGCTGAGACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040112.1 True 270 mRNA 0.51 1 1653720 1653989

Neighbor

gene id symbol gene type direction distance location
LOC110507041 LOC106612348 coding upstream 45628 1602116 ~ 1608092 (+)
LOC110507313 LOC106579790 coding upstream 52290 1580680 ~ 1601430 (+)
gmnc gmnc coding upstream 351228 1290585 ~ 1302492 (+)
LOC110507306 LOC106579799 coding upstream 529566 1122000 ~ 1124154 (+)
LOC110507305 LOC106579784 coding upstream 562021 1075178 ~ 1091699 (+)
LOC118944796 NA coding downstream 1010 1654999 ~ 1655266 (+)
LOC118944798 NA coding downstream 13490 1667479 ~ 1667741 (+)
LOC110507315 LOC106579793 coding downstream 68609 1722598 ~ 1751727 (+)
LOC110507042 dgkd coding downstream 109716 1763705 ~ 1814445 (+)
LOC110507316 fa9 coding downstream 171192 1825181 ~ 1848777 (+)
G2040172 NA non-coding upstream 65735 1570075 ~ 1587985 (+)
G2040169 NA non-coding upstream 88948 1564361 ~ 1564772 (+)
G2040168 NA non-coding upstream 90147 1563191 ~ 1563573 (+)
G2040167 NA non-coding upstream 90915 1562513 ~ 1562805 (+)
G2040166 NA non-coding upstream 91425 1561999 ~ 1562295 (+)
G2040221 NA non-coding downstream 10952 1664941 ~ 1688621 (+)
G2040235 NA non-coding downstream 42660 1696649 ~ 1730268 (+)
G2040241 NA non-coding downstream 49529 1703518 ~ 1745620 (+)
G2040319 NA non-coding downstream 182434 1836423 ~ 1850761 (+)
LOC110507322 LOC106580637 non-coding downstream 311615 1965604 ~ 1972042 (+)
G2040080 NA other upstream 155155 1442677 ~ 1498565 (+)
LOC110507300 NA other upstream 835252 817321 ~ 831714 (+)
G2040773 LOC106580643 other downstream 879905 2533894 ~ 2542349 (+)
rpl35a LOC106612432 other downstream 1016400 2670319 ~ 2685738 (+)
G2040863 NA other downstream 1145792 2799781 ~ 2802001 (+)
LOC110507334 LOC106612406 other downstream 1160287 2813649 ~ 2815411 (+)
G2040882 NA other downstream 1180107 2834096 ~ 2838927 (+)

Expression


Co-expression Network