LOC110507331


Basic Information

Item Value
gene id LOC110507331
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2585011 ~ 2595625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002471111.2
atgatgaatcagacaccttaccgatagcaacagctcatggtcctcctggaatcagaagttttccAGAAGTATTTTTTTGAGTCAATGGTGGAACGTAGTAAGAGAAATGCTGATTAATGTCTTGCTCAAGCTGTGTATGCAGGTTCACCTCTGATCCTCACAGGTAATGTGtgttggaagagatttctgaatgttcttcgtcCAGCGtgtacacccctccaaccagacatgctttatctactaatttaatggatgcagagttcaagtgaaggtcaagcaaatcatagtgCAAGCAGACtatattgcaatcatctctgatgggtgatCGAAttttcgtgggcaaggaataattaactacatcatctccacccctcaaccagtattctacaagagcacagacacaagggacaacagacacaccggtctctacattgcagatgagctgaagtcAGTCATCAAATACCTTGGACAAccgaagggcaattgaactgattccagaggctgacccaaaacaccGCTGGCGGAGGAGGGGTAGtcgacttctagtccgactcggGAGGCGAGCACACcgcccaccgcttccgagtatattactcaatTTTATTAAGtgtctggataataaagttgacgatactctgtttcat

Function

NR:

description
PREDICTED: uncharacterized protein LOC109200594

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002471111.2 True 644 mRNA 0.45 2 2585011 2595625

Neighbor

gene id symbol gene type direction distance location
LOC110507327 LOC106612439 coding upstream 86667 2495659 ~ 2498344 (+)
LOC110507322 LOC106580637 coding upstream 612969 1965604 ~ 1972042 (+)
LOC118944727 NA coding upstream 679321 1892454 ~ 1905690 (+)
LOC110507316 fa9 coding upstream 736234 1825181 ~ 1848777 (+)
LOC110507042 dgkd coding upstream 770566 1763705 ~ 1814445 (+)
rpl35a LOC106612432 coding downstream 74694 2670319 ~ 2685738 (+)
abcc5 LOC106580650 coding downstream 92379 2688004 ~ 2752049 (+)
rnpepl1 rnpepl1 coding downstream 168778 2764403 ~ 2799047 (+)
LOC110507256 LOC106612406 coding downstream 212658 2808283 ~ 2810261 (+)
LOC110507334 LOC106612406 coding downstream 218024 2813649 ~ 2815411 (+)
G2040774 LOC106580643 non-coding upstream 56041 2528011 ~ 2528970 (+)
G2040768 NA non-coding upstream 64705 2518728 ~ 2520306 (+)
G2040610 NA non-coding upstream 283632 2289651 ~ 2301379 (+)
G2040607 NA non-coding upstream 290224 2286389 ~ 2294787 (+)
G2040842 NA non-coding downstream 126662 2722287 ~ 2740038 (+)
G2040761 NA non-coding downstream 147317 2742942 ~ 2743297 (+)
G2040865 NA non-coding downstream 206777 2802402 ~ 2802622 (+)
G2040874 NA non-coding downstream 215886 2811511 ~ 2812731 (+)
G2040877 NA non-coding downstream 220217 2815842 ~ 2890204 (+)
G2040773 LOC106580643 other upstream 42662 2533894 ~ 2542349 (+)
G2040180 atg16l1 other upstream 929675 1652840 ~ 1655336 (+)
G2040080 NA other upstream 1086446 1442677 ~ 1498565 (+)
LOC110507300 NA other upstream 1766543 817321 ~ 831714 (+)
G2040863 NA other downstream 204156 2799781 ~ 2802001 (+)
G2040882 NA other downstream 238471 2834096 ~ 2838927 (+)
G2043193 NA other downstream 1809833 4405458 ~ 4406126 (+)

Expression


Co-expression Network