LOC110507256 (LOC106612406)


Basic Information

Item Value
gene id LOC110507256
gene name LOC106612406
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2808283 ~ 2810261 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587146.2
cgcattaccttacgttagctcaaccgtcccgcaggggacccaccaatcctgaagaagttttaacccTTCAGGGCCCATTGCAACCAACATTGGCAGCAATGAACAACCTCAAGGTGATCTCTACGTGTTAAAGGGATGTTCCACTccatagcaaaacattttgcttaCAAAAAACTGGTGTTTTGAAAAATAATTTTTCTTTCTTCTTGGACAGGTCCAGGTACTCCCTTCctatttcagtctgttttcttccatttggtgcctactGAATGGCTACGAGAGCTCGTCAACGCTGATGAGTTCTGAGCTGGAGACGACAAGCTTCTTCGACTCTGAAGACGGTGATGCATCCAGTCGGTTCAGTGGTTCCACGGAGCAGAGCACGTCGTCGAGGCTCGTGAGACGATATTGGCGGCGACGGCGGAAACCCAAAGCGCCACAGATGGAgaggtcGTCCTCTTTCAGCAGCGTCACAGATTCCACCATGTCACTGAACATCACCACTGTCACTTTAAATATGGAGAAGTATAACTTCCTGGGCATCAGTATTGTGGGTCAGAGTAACGAGAAAGGAGATGGAGGAATCTACATTGACTCTATCATGAAGGGATAGAGCCCCGGCCCCGGTGGCCGCCGACGGATGCATCGAGCCTGGAGACATGCTGCTGCAGGTGTGTGTTAAGAGTGTGTATGTTTAacagaggtggaaaaagtacccaattgtcatacttgagtaaaagaaaAGACACAGGTTAAacctcttcagtct

Function

NR:

description
segment polarity protein dishevelled homolog DVL-3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587146.2 True 769 mRNA 0.48 4 2808283 2810261

Neighbor

gene id symbol gene type direction distance location
rnpepl1 rnpepl1 coding upstream 9236 2764403 ~ 2799047 (+)
abcc5 LOC106580650 coding upstream 56234 2688004 ~ 2752049 (+)
rpl35a LOC106612432 coding upstream 122545 2670319 ~ 2685738 (+)
LOC110507330 LOC106580646 coding upstream 157737 2567766 ~ 2650546 (+)
LOC110507331 NA coding upstream 212658 2585011 ~ 2595625 (+)
LOC110507334 LOC106612406 coding downstream 3388 2813649 ~ 2815411 (+)
LOC118944765 NA coding downstream 40692 2850953 ~ 2854454 (+)
LOC110507335 NA coding downstream 71367 2881628 ~ 2889241 (+)
LOC110507336 LOC106566134 coding downstream 92544 2902805 ~ 2916027 (+)
ano7 LOC106580699 coding downstream 170752 2981013 ~ 3029319 (+)
G2040865 NA non-coding upstream 5661 2802402 ~ 2802622 (+)
G2040761 NA non-coding upstream 64986 2742942 ~ 2743297 (+)
G2040842 NA non-coding upstream 68245 2722287 ~ 2740038 (+)
G2040790 NA non-coding upstream 164891 2553119 ~ 2643392 (+)
G2040774 LOC106580643 non-coding upstream 279313 2528011 ~ 2528970 (+)
G2040874 NA non-coding downstream 1250 2811511 ~ 2812731 (+)
G2040877 NA non-coding downstream 5581 2815842 ~ 2890204 (+)
G2040899 NA non-coding downstream 38152 2848413 ~ 2848934 (+)
G2040923 NA non-coding downstream 88441 2898702 ~ 2898924 (+)
G2040863 NA other upstream 6282 2799781 ~ 2802001 (+)
G2040773 LOC106580643 other upstream 265934 2533894 ~ 2542349 (+)
G2040180 atg16l1 other upstream 1152947 1652840 ~ 1655336 (+)
G2040080 NA other upstream 1309718 1442677 ~ 1498565 (+)
G2040882 NA other downstream 23835 2834096 ~ 2838927 (+)
G2043193 NA other downstream 1595197 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1875624 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 3081586 5874691 ~ 5896127 (+)

Expression


Co-expression Network