LOC110507335


Basic Information

Item Value
gene id LOC110507335
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 2881628 ~ 2889241 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587258.2
gacgtataatctagtcgACGCTccttcaacaacaacagctagtcAGACACCTCGGTAGCTTTCTAGCAAACATAGCTACAACATTCACGCTCTTTACACTGTTTTGGTGTATATTAATCGCTGTGTATAAAACACACGTCTGTCGTATGTACTTGTTGGCTCATTTGATTATATATTTACGTTGTTTGTCAGCTAGCTGGTTTGCTAAGTTAGCTTAGAACTAGGCAagtcgctaatgctaactagctaacatccccgaccatgagttcactaagctactcttctcctgataaagaagaggaggtctgctggacggagaaagtaACTCTcgttaaagaggaggaggaagagggggctgtttcaataaaaaaacaagtgaagggtgaggctgttacagtgaaagaagaagagaaagacgtttcagtgaaagaagaggaagactcgttcagagtgaaagaggaggaggatgttacagtggagaaagagaaagaggaggatgcaTTTTTTGgactgaaagaggaggagggggagatgactgtCACATCCAAAAAGGAGGAGGAAACTGGATATCTGGTCCCGGTTATCCAAACTCATCTTAAGGCAACcaatggttctaacgatgaactgAGCCGTAAGATGGTTTTGAGAAACGGGGccctgattaacactagagagagacaggactacCGTGggtcctctggggagcctcaacaacctcatgatgtTGACAAGGCAGAGAAGactctctccagatcagaacacgtCAAGAAACCCCAGCAGAGATCCACAGGGAAGAgaactcactgctgctctgactgtgggaagagattcaccacctcatcaggcattaaaattcatcagagaatccacacaggagagaaacctcacggctgtgatcaatgtgggaggagttttgtTCAATATGGCCATCTGaagatacaccagagaacacacacaggagagaaaccgtatagctgtactcaatgtgggaagagttttagtcATTCAACcagcctgatatcacaccagagaacacacacaggagagaaaccgtatAGCTGTGATGAATGTGGGGAGATTTTTACTCAGCTAAGcagcctgatatcacaccagagaacacacacgggAGTGAAACCGTACAGCTGTGatgaatgtgggaagagttttactcagctaagcagcctgatatcacaccagagaacacacacaggcgagaaaccttatagctgttctgaatgtgggaagagttttactcagctaagcagcctgatatcacaccagagaacacacacaggagagaaaccttatagctgtgatgaaTGTGGGAAGATGTTTACTAGGTCTAGCAatctgactctacaccagagaatacatacaggagagaaacctttcagctgtactcaatgtgggaagagttttactaagCTAAGCAACCtcatatcacaccagagaacacacacaggagagaaaccctatagctgtgatcaatgtgggaagagttttgttcaatctagctatctgaagatacaccagagaacacacacaggagagaaaccttttagctgtactcaatgtgggaagagttttatttCATCTAGCCTTCTGacagtacaccagagaacacacacaggagagaaaccttatagctgtaatcaatgtgtgAAGAGTTTTGCTACATCTGGGCAGCTGAcgatacaccagagaacacacacacaatggaaatCTTTTAGCTCTAATtgatgtgggaagagttttactcggTTAAACAGCCTGATacgacaccagagaacacacaggagagaaatatcttagctg

Function

NR:

description
zinc finger protein 501-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587258.2 True 1815 mRNA 0.44 2 2881628 2889241

Neighbor

gene id symbol gene type direction distance location
LOC118944765 NA coding upstream 27174 2850953 ~ 2854454 (+)
LOC110507334 LOC106612406 coding upstream 66217 2813649 ~ 2815411 (+)
LOC110507256 LOC106612406 coding upstream 71367 2808283 ~ 2810261 (+)
rnpepl1 rnpepl1 coding upstream 82581 2764403 ~ 2799047 (+)
abcc5 LOC106580650 coding upstream 129579 2688004 ~ 2752049 (+)
LOC110507336 LOC106566134 coding downstream 13564 2902805 ~ 2916027 (+)
ano7 LOC106580699 coding downstream 91772 2981013 ~ 3029319 (+)
LOC118944768 NA coding downstream 155304 3044545 ~ 3046330 (+)
rnf168 LOC106580664 coding downstream 175661 3064902 ~ 3073180 (+)
LOC110507257 LOC106580698 coding downstream 194464 3083705 ~ 3085115 (+)
G2040899 NA non-coding upstream 32694 2848413 ~ 2848934 (+)
G2040874 NA non-coding upstream 68897 2811511 ~ 2812731 (+)
G2040865 NA non-coding upstream 79006 2802402 ~ 2802622 (+)
G2040761 NA non-coding upstream 138331 2742942 ~ 2743297 (+)
G2040842 NA non-coding upstream 141590 2722287 ~ 2740038 (+)
G2040923 NA non-coding downstream 9461 2898702 ~ 2898924 (+)
G2040927 NA non-coding downstream 17576 2906817 ~ 2907037 (+)
G2040928 NA non-coding downstream 18154 2907395 ~ 2908036 (+)
G2040929 LOC100136012 non-coding downstream 18899 2908140 ~ 2908375 (+)
G2040882 NA other upstream 42701 2834096 ~ 2838927 (+)
G2040863 NA other upstream 79627 2799781 ~ 2802001 (+)
rpl35a LOC106612432 other upstream 195890 2670319 ~ 2685738 (+)
G2040773 LOC106580643 other upstream 339279 2533894 ~ 2542349 (+)
G2043193 NA other downstream 1516217 4405458 ~ 4406126 (+)
LOC110507374 spa17 other downstream 1796644 4685868 ~ 4692872 (+)
LOC110507397 sfr16 other downstream 3002606 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 3008276 5897208 ~ 5910058 (+)
G2045522 NA other downstream 3605592 6494833 ~ 6495134 (+)

Expression


Co-expression Network