sik2b (sik2)


Basic Information

Item Value
gene id sik2b
gene name sik2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 4200942 ~ 4268979 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964956.1
TCTGACGTCAATGTACGTCAACGAGAGAATATGATGCCTCCTGCAACTCAACTCATGTACTTTAGCTAATATAGGTAGCTAGCTGAAACAGTATAGCTCTATTGTATTGGAGAACGTGGCGTGACAGCCGTAAAATGTATTCTGTCGTCTCGTTGGTCTGAAGGGTCGTTAACGTTCAAACTGGCCGGGCGACCAAGAAATGGACTTTGTCTATTTTGAATAGACAACATTTTAGCGGGCGGTTTGTTTTCCCTTCAACATCTGTAGGCTCAAGTCGCGAGTCCCTAGGTCCTCACCCCCAAACCACATTTAATAAAGCATGGTCATGGCTGACAATCACCAAAAACCGATGGTCCGGGGTCCTGTCCGAGTGGGCTTCTACGATATCGAACGTACTCTAGGAAAGGGTAATTTCGCAGTTGTGAAGCTGGCTAGACATCGCATTACCAAGACCGAGGTTGCCATTAAAATCATCGACAAGAGCCAACTAGATGCTGTGAACCTGGAGAAGATCTACCGGGAGGTACAGATCATGAAAATGTTGGACCACCCGCACATCATCAAGTTGTACCAGGTAATGGAGACCAAGAACATGCTCTACTTGGTGACAGAGTATGCCAAAAACGGGGAGATTTTCGaCTACCTGGCCAAACACGGGAGACTGAGCGAGCTGGAAGCGCGGCGtaagttctggcagatcctgtcAGCGGTGGAGTACTGCCACAACCGCAACATAGTCCACCGAGACCTGAAGGCTGAGAACCTGCTGCTGGACGGACACATGAACATCAAGATAGCAGATTTTGGCTTTGGGAACTTCTTCCAGCCCGGAGAGCCCCTGGCCACGTGGTGTGGCAGCCCACCCTACGCCGCTCCGGAGGTGTTCGAGGGACAACAGTACGAGGGCCCCCAGCTGGACATCTGGAGTATGGGGGTGGTGCTGTACGTGCTGGTGTGTGGCGCCCTGCCCTTCGATGGCCCCACCCTGCCCGTGCTCCGACAGCGCGTCTTGGAGGGTCGCTTCCGCATCCCCTACTTCATGACAGAAGACTGCGAGCACCTGATCCGGAGGATGCTGGTGCTGGACCCGTCCAAGCGTCTGTCGGTAGCCCAGATCAAGGAGCACAAGTGGATGGCACTGGACGTGCCGGTGCAGAGGCCCATGCTGTACCAGCAGGAGAGCGACCTGGGCGTGGGCGAGTACAGCGAGCAGGTTCTGCGGCTCATGCACAGCCTGGGCATCGACCAACACAAGACAATCGAGTCGCTCCAGAACAAGAGTTACAACCACTTTGCTGCTATCTACTACCTGCTGGTGGAGCGTCTCAAGTCCCACCGCTGCAGCTTTCCTGTGGAGCAGCGGCTTGACGTACACCAGCGCCGGCCCAGCACCATCGCCGAGCAGACTGTCGTCAAGCCGAGCGAGCCGAGCGGTGGCTCCCCCCAGGTGGGTCTCTTGTCCCAGGGGGTGCGGGGTCTCCTACGCTCCCCTGCCCTGCCCCAAGCCTCGGCCGATGCCTTTAACTTCCCGCAGTCGCCTCTTCTGCCTGAGCACAGCTTCATGGTCGAGGACGTGGCCACTCCTAAAGTGAATGGCTGCATGCTGGACCCCCTGCCCCCCACAGTGCTGCGCAAGTCCAGCGCGTCGTCACCCAGTAACATGATGGAGACGTCCATCGACGAGGGCATAGAGACGGAGGAGCCCGACGCCGAGGACGACCCCGCCCACCTCTTCTCCGCCTTCCAGACGGCCCGCTTCGGCCAGCGCCGACACACCCTGTCCGAGGTCACTAACCAGCTGGGCCCCGTCATCAACCAAGGTAAACTGTTCACCACGGGCCACAACCCGTCCCTGGGCAGCGTGGACTCCGACATGGGCTACGACATGGGCTCCTTGCACAGTGACCTGAGTCTGCTGGAGGACGCTCCCTCTCTCAGCGAGGTGGTCCTGGCCAACACCCACAGTTCGGGGCCCCACATGACCCAGGGCCCCTTCATGAGCCAGCGGCCCCCCAACCCCACCATGCAGGGCCTGAGCTCCAAAAGGAGGGAGGCCCACAATCGCTCGCCCATCAGCTTCAGGGAGGGCCGCCGCGCTTCCGACACCTCCCTCACACAAGGTCTGGTTGCGTTCCGGCAGCATCTCCAGAACCTGGCGCGGACCAAAGGCATCCTAGAGCTGAACAAACAGATGTATGAGCAGATGGGCTCTGGGGAGGACCCATCCTCCATGAGGACCCTGGGGCCCCATGCAAACCTGCAGAACCTGCTGGACCCCAAGCTGCAGGGAGAGGCATCCAAGCACGAggataacttggctttataccAGGGTGGCGCCCAACCTCTACTGTCCCGAAGACAAAGTCTCGAGACGCAATATCTCACGCACAGACTACAGAAAGCTAGTGTCATGGCTAATGTGAGTCCTGCTAGCTGCCAGCTCTTCTGTAAGGAGAATCCTCGGAGTCTAGAGCAACAGCTGCAGGAGCATAGGTTGCACCAGAAGAGGATGTACCTCCAGAAGCAGACTCACCTCCAAACCTACTTCAACCAGATGCAGATAGTAGAGGGTTCCTATCCAGGGGACCCAGGGGCCCCTCCACAGCAGCAGGGGGCAATGGCTGGGGCCCACAAGCAGCAGGGCAGCTCCCAGTCCTCCCCTCCCTACACCCAGGCCCTCAGCCCCCTCATGGAGCCCAGCGACAACCTGGTCTACGACacctacctggcccaccactacTCCCACCTCAGCCCAGTACTCATGCCCCCCGGCCTGGCCGGCCAGCTGCAGAATCACCCCCCCGAGGCCCTGGGCTACAGCTACCAGCTGTGTGACCAGCAGGGACAGTTTCACTCCCCTCAAGAGGCACTTTATCCAGAACAATACGAGTTCCCCCTGGAGCCCGGGCAGCCACACCCGCCTGGCCCAGGAGAGGCACCTGTGGCCGGGTACGAGGGGCTAGCACTCCCCGCCGAACTCCAGGACTCCTTTCTGGACAGCGAGATGATGGAGACTGTAGACTCGCAGCACGGCTTCGTACTGGTGAACTGAAGCCGGTGGAACTGTGGGGAGAAAGCGGTATTACCGACAGTTGAAAACCTACACAGCATTATGTCGTAGATATGATGGAGTGGAGATGGGGGTCAAGGTCCATgggaaagtgtttttttttttttttttgtatcaatGAAtactatttttgttgttgtggtgaACCAACCTCAGAACCTTTCTACCAAAATCATCCCCATCTCCCTTCTTCCCACTCCTCTGTTCCCATCAGCCCTATGCTAGGACCCAGGCCTGGTGACTGCCTGGGCGATAAGGGCGTGCCAGcatggctggctgggtgggtatATGTGGATGGATGTTGCCATGATGGGAGGTGTCACGTGTGAAGTGATATCGCTCCACAGGAACACAAATTGCCTCAAAGCTGACAGCAGCCTCGTCGAGAAGAGCTGGACGGTAAAAAAAGACTTAGCACAGTTTGGTCGTTTGGAAGACCTGCACAACGGAACTTGGCTTACCGAAAGCACAATCCAAACGACAACCATGCTATTTAGTATTGAAATAGGACAAGAACTCTCAAAGACACATTGCGTGTTTGacatagtaaaacaaggaacgaACAAGAGACAAAGTGATGAATTAATGCGCGCGTGATAAGTGCAGTGTTCGTCAATATTGAAGCAATATATCCATCTGGGACTAGGGAGCCGCACGGGCGACTTCCTCACCAGAAAGTCGTACTTTAATGTGACGTTTCTCGGGAGAATTCCAGTATGATGACTCACAGCCAACATATCCACAGTGACAGCTCATCAGCGCGTAGACAGCGATGACGTAATCGTGAGATAATCCCCCCACCAATCCCATCGAAGCAGATAAAAgggaagaaaaaaatacagaaacaGAACTCCAATCTATATTTAATGAAGAGAAACACGATTTATGTTCATGTTCCTTATAAATGGGGTAATTATTTCCAACAAACCACACAAATCCGTTTGGGAAGCCCTTCACTAGGCGCTAAAAGGAATAAGTTAAGTCCCATCAAATCAGTTTGCTGCACTAGTGTTAGGTGAGGGTTTTATCTCCAGATCGTGTCCTTATACCTTCTGGGATGTGCAGCTGATGTGGGCCTAACCGTGTTCATGATTCTGTGGTGTAATATACCTAAATACCTACTGGGTTTCTGAAGGAATGTGTTTCTCTAACCTAAAGGTTGCTGTAGAAAAAATATGTATAATGAGATGAAGGAAAAGACAAATGTAAGAACGGAACGTTAGTCACACAACACTGGATTAATTGTGTGAAGTTTCACAGTGGCTCTCTCACAGCAAGCTTAGAATGAACACTTCACTTTTGAATCTACTTGAAGCATACAGATCTCTGATGAGGAAATAGAACTCTACTTTTCATGAAATAGGATGAAAAACAAGTGGTCGAGGTCCGAGGCAAAGTCTGCTTCtcaaaatggcagcctattccctacatagttacACTGCttttatgggctctggtcaaagtagtgcactatataggtatacgggtgccatttgggacactgccaTAGACTAGACTACAGGATTGTCTGTGGAAGCTGAATTACTGGAGCACTTTTACAAGGTAAAAAAAAGGAAATATAGCGAGAgcgaggtggtggtggtagtcagAATGGTGTTTAGCCTAGTCTGCTGCTTCCCCGGGAGACTAAAACAAAAGCGAGGGAACCATTTACTCTCTGTTATCCCAATAAATGGACACAAAACATTTGGTTCTATCAAAGAAAGAGCAGAGAATAACACTATTGGTTGTTCATTgtgctttgtaaaaaaaaaaaaaaaggggggggggtttAGAGACTTGAGTGCTCTCAAGATGCAACAAATATTGTGTTGAGTGTGAATAGTGTTCAGTGTGCCTTTTTTTACTTGTTTTGTTGAAGATTAGAGTATTTTAGCGTTTTATTTCTAGTTTTAATTCCCgttatgtttttattttggggtatCCTTTCCGGAAATAAGTAGACCCAGGTTTTTACAAAGGTACGAAACCAAAGTCCCCTCAGACGTTTCCCTGTCCAACCACACCATGTGGAGTTAGGAGCTTCTTGGTTTTAGCTTCTTGACAGTGCTTTTTTTTGGTCCATCAGTATATGCCAttttaaaaaaagtattataGCAATATTTCTAAGTAATAGTTGAAGATGTAAAGAAAACAATTAAGATTAGGAGTGGATGTGTTTCAGTATCATAATTTCACTTCCTGCTGACAAACGCCTGTCTTTAGAAAATCCAATTTTATATTTACCTTCATTGATGTTGACCACACATAAGCTAACTTGCTGTTGAGATTAAAAAAAAGGTTTATCGAA

Function

symbol description
sik2 Enables ATP binding activity; magnesium ion binding activity; and protein serine/threonine kinase activity. Involved in intracellular signal transduction and protein autophosphorylation. Predicted to be located in nucleus. Predicted to be active in cytoplasm.

NR:

description
serine/threonine-protein kinase SIK2-like

GO: NA

KEGG:

id description
K16311 SIK2; serine/threonine-protein kinase SIK2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964956.1 True 5381 mRNA 0.51 15 4200942 4268979

Neighbor

gene id symbol gene type direction distance location
LOC110507359 med29 coding downstream 52032 4144222 ~ 4148910 (-)
LOC110507357 shox2 coding downstream 311685 3881456 ~ 3889257 (-)
LOC118944719 LOC106580716 coding downstream 447296 3746369 ~ 3753646 (-)
LOC118944734 LOC106580716 coding downstream 460874 3735454 ~ 3740068 (-)
LOC110507640 LOC106580716 coding downstream 466011 3729977 ~ 3734931 (-)
laynb layn coding upstream 1483 4270462 ~ 4276432 (-)
zgc:162608 LOC106612462 coding upstream 22421 4291400 ~ 4298680 (-)
drd2a d2r2 coding upstream 203072 4472051 ~ 4505952 (-)
scn3b LOC106612464 coding upstream 281246 4550225 ~ 4572371 (-)
LOC110507371 NA coding upstream 304051 4573030 ~ 4626743 (-)
G2043374 NA non-coding downstream 4808 4195279 ~ 4196134 (-)
G2043373 NA non-coding downstream 7375 4192793 ~ 4193567 (-)
G2043337 NA non-coding downstream 129025 4071105 ~ 4071917 (-)
G2043227 NA non-coding downstream 247026 3918465 ~ 3953916 (-)
G2042874 NA non-coding downstream 335324 3865370 ~ 3865618 (-)
G2043439 NA non-coding upstream 46723 4315702 ~ 4316070 (-)
G2043441 NA non-coding upstream 48814 4317793 ~ 4318109 (-)
G2043442 NA non-coding upstream 49924 4318903 ~ 4319268 (-)
G2043443 NA non-coding upstream 51129 4320108 ~ 4320351 (-)
G2043446 NA non-coding upstream 54620 4323599 ~ 4323821 (-)
LOC110507356 LOC106580682 other downstream 659189 3539029 ~ 3718487 (-)
G2042608 NA other downstream 797945 3400579 ~ 3402997 (-)
G2041885 NA other downstream 1301554 2898987 ~ 2899388 (-)
G2041883 NA other downstream 1304551 2895576 ~ 2896391 (-)
LOC110507298 spcs2 other downstream 3430205 769005 ~ 776178 (-)
G2043460 NA other upstream 74620 4343599 ~ 4348409 (-)
G2043483 NA other upstream 109955 4378934 ~ 4379429 (-)
G2043518 NA other upstream 145086 4414065 ~ 4414423 (-)
kmt2a kmt2a other upstream 1272048 5531877 ~ 5586139 (-)
G2045223 LOC106612485 other upstream 1599596 5868575 ~ 5870139 (-)

Expression


Co-expression Network