LOC110507381 (tm136)



Basic Information


Item Value
gene id LOC110507381
gene name tm136
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 4773306 ~ 4777981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021587333.2
CACCACCCGACCACGGTAAAGCTACTCCTACATTCGGGAACCAGGCTAGCAGTAATTATATTTTGTTTTTGTCCGAGTGTTGGAAACTAATTCACTAATTTCGTTTAGGGTTGGGTAGCTATCTGCAGCACCATTTGCTGACACTGCAAGGTGAGGGAGTTGGCTATTGAGATTAGATACTCGAGACGCAATTGTTTGTTTTTGAGCCGAGTAACGTAATGGACACAAAGAACCGAAGATGAAGTGACTGTCACCCGAGGGACCATGCTGGCCACAAAGAGACTAGAGATGTCACCGACATGAACGTGCAAGCGGTGCATAAATAAGcTGAGGGATGACATCGCTGGCTGTCGGCGTGGTCCTCTGCCTAACAGGCTGGATCACTCTCTACACCCTACTGTGTAGCACCAGTGGCAGCCATGGCTCTGAGTGGAACTGTAGGCTGGTCACACTGCTCCATGGAATCCTTGCAGTCTGTATAACAGCATACATAGGCTATGTGGATGGACCTTGGCCCTTCACACATCCAGGCACAAAGAACACCCCCCTTCAGATCACTGCTATGGTCATTAGCCTGGGCTACTTCATCTTCGATATGGGCTGGTGTGTTTACTTCAGCACAGAGGGCCCGGTGATGCTGGCTCACCACACCATGAGCATCCTGGGTATCTTGTTGACCCTGAGCTTGGGGGAATCGGGCATCGAGTCCTGCGCCGTACTCTTTGGCAGTGAGATCACCAACCCCCTTCTGCAAGCTCGCTGGTTCCTGAGACAGTTGGGATGCTATGAGAGCCTGACAGGGGAGGCGGTGGATGTTTTGTTTGTAGTGCTATTTGTATTTATGCGCATAGTGGTTGGCGGAAGGATGTTGTACTGCGAGCTCATCTCCACACGGCCCAGGTTCATTATAAAGTGTGGGGGAGTTGCCATGTATGTGCTGTCTTGGGTGTTCATGGTGGACATTGGTCATTTCGCCTACCGCAAGAGTCAATCCAAATACAGACGCTGGCGAGACCAACACAGATTGGAAACAGTTAACAGACATGATGGAAAGACAGACTGAAAGACTTCCTGATCTTTAGAAGATTAATATAAACATCCAATGTTTATA

Function


NR:

description
transmembrane protein 136-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021587333.2 True 1111 mRNA 0.49 3 4773306 4777981
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110507377 LOC106612468 coding upstream 245 4743678 ~ 4773061 (+)
LOC110507376 LOC106612467 coding upstream 48327 4709049 ~ 4724979 (+)
hepacama LOC106612425 coding upstream 69686 4695722 ~ 4703620 (+)
LOC110507374 spa17 coding upstream 82156 4685868 ~ 4692872 (+)
LOC110507259 NA coding upstream 99218 4670439 ~ 4674088 (+)
LOC110507382 NA coding downstream 12193 4790174 ~ 4858588 (+)
LOC110507051 LOC106612471 coding downstream 101947 4879928 ~ 5330923 (+)
LOC118944797 NA coding downstream 532973 5310954 ~ 5311006 (+)
cbl cbl coding downstream 597575 5375556 ~ 5514824 (+)
LOC110507053 rnf26 coding downstream 727836 5505817 ~ 5511748 (+)
G2043559 NA non-coding upstream 320108 4452950 ~ 4453198 (+)
G2043200 NA non-coding upstream 355075 4417994 ~ 4418231 (+)
G2043199 NA non-coding upstream 356478 4416499 ~ 4416828 (+)
G2043198 NA non-coding upstream 358557 4414473 ~ 4414749 (+)
G2043196 NA non-coding upstream 363082 4409990 ~ 4410224 (+)
G2043904 NA non-coding downstream 305651 5083632 ~ 5105824 (+)
G2043754 NA non-coding downstream 553152 5331133 ~ 5332221 (+)
G2043755 NA non-coding downstream 555262 5333243 ~ 5333478 (+)
G2044047 NA non-coding downstream 557336 5335317 ~ 5335626 (+)
G2043193 NA other upstream 367180 4405458 ~ 4406126 (+)
G2040882 NA other upstream 1934379 2834096 ~ 2838927 (+)
LOC110507334 LOC106612406 other upstream 1957965 2813649 ~ 2815411 (+)
G2040863 NA other upstream 1971305 2799781 ~ 2802001 (+)
LOC110507397 sfr16 other downstream 1113866 5874691 ~ 5896127 (+)
LOC110507398 znf296 other downstream 1119536 5897208 ~ 5910058 (+)
G2045522 NA other downstream 1716852 6494833 ~ 6495134 (+)
G2045655 NA other downstream 1914563 6692544 ~ 6693044 (+)
G2045665 NA other downstream 1941783 6719764 ~ 6720692 (+)

Expression


LOC110507381(tm136) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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LOC110507381(tm136) Expression in each Bioproject

Bar chart with 20 bars.
LOC110507381(tm136) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network