Gene
RNA
| Item | Value |
|---|---|
| gene id | c27h19orf54 |
| gene name | clg01h19orf54 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 5795135 ~ 5798492 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| UPF0692 protein C19orf54 homolog isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021587366.2 | False | 1882 | mRNA | 0.50 | 7 | 5795135 | 5798492 |
| XM_021587367.2 | True | 1867 | mRNA | 0.50 | 7 | 5795135 | 5798492 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944669 | gfm1 | coding | downstream | 28303 | 5759611 ~ 5766832 (-) |
| LOC110507390 | LOC106612480 | coding | downstream | 60770 | 5720390 ~ 5734365 (-) |
| LOC110507389 | LOC105011778 | coding | downstream | 85046 | 5679726 ~ 5710089 (-) |
| LOC110507260 | nlrx1 | coding | downstream | 158237 | 5635480 ~ 5636898 (-) |
| pdzd3a | LOC106612428 | coding | downstream | 161120 | 5619097 ~ 5634015 (-) |
| LOC110507406 | map3k10 | coding | upstream | 269932 | 6068424 ~ 6105009 (-) |
| LOC110507409 | LOC106612510 | coding | upstream | 424435 | 6222927 ~ 6224524 (-) |
| LOC110507410 | LOC106612495 | coding | upstream | 429621 | 6228113 ~ 6235871 (-) |
| LOC110507423 | NA | coding | upstream | 532785 | 6331277 ~ 6334277 (-) |
| LOC110507420 | mrpl28 | coding | upstream | 550652 | 6349144 ~ 6351899 (-) |
| G2045090 | NA | non-coding | downstream | 41093 | 5753656 ~ 5754042 (-) |
| G2045088 | NA | non-coding | downstream | 42355 | 5752548 ~ 5752780 (-) |
| G2045023 | NA | non-coding | downstream | 143542 | 5651207 ~ 5651593 (-) |
| G2045021 | NA | non-coding | downstream | 148345 | 5646480 ~ 5646790 (-) |
| G2044951 | NA | non-coding | downstream | 157828 | 5637074 ~ 5637307 (-) |
| G2045187 | NA | non-coding | upstream | 3926 | 5802418 ~ 5802814 (-) |
| G2045188 | NA | non-coding | upstream | 4386 | 5802878 ~ 5803096 (-) |
| G2045191 | NA | non-coding | upstream | 7684 | 5806176 ~ 5806656 (-) |
| G2045193 | NA | non-coding | upstream | 9894 | 5808386 ~ 5808676 (-) |
| G2045197 | NA | non-coding | upstream | 16479 | 5814971 ~ 5815223 (-) |
| kmt2a | kmt2a | other | downstream | 253502 | 5531877 ~ 5586139 (-) |
| G2043518 | NA | other | downstream | 1380712 | 4414065 ~ 4414423 (-) |
| G2043483 | NA | other | downstream | 1415706 | 4378934 ~ 4379429 (-) |
| G2043460 | NA | other | downstream | 1446726 | 4343599 ~ 4348409 (-) |
| LOC110507356 | LOC106580682 | other | downstream | 2253382 | 3539029 ~ 3718487 (-) |
| G2045223 | LOC106612485 | other | upstream | 70083 | 5868575 ~ 5870139 (-) |
| LOC110507421 | gemin7 | other | upstream | 691230 | 6489704 ~ 6491119 (-) |
| LOC110507418 | NA | other | upstream | 703923 | 6501784 ~ 6512110 (-) |
| LOC110507058 | egln2 | other | upstream | 1193891 | 6992367 ~ 7028249 (-) |
