qpctla (LOC105011981)


Basic Information

Item Value
gene id qpctla
gene name LOC105011981
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6217939 ~ 6223022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587392.2
CGTCACTGTCAACGAAAACCCGGAAATCAGGCACCAAAAAAAGCAAGTTGTGTTGCGTTATCAGTGGATTCGATTACTTCAGTTGGGTGAGAAGCTACAGAACCACGTTAGTTACAAACCACGTTAGTTGCTGCATCTACCTATTGAAAATAAAAGCCGAAATCAGGTGTAAGACATTTGAGGACAACGGATTTCTAGATAAGGAAGAGTAGCCTAACCATCGATAGATTCATGATATCGATAAATGTTCAACTCCAATGAAGCAAGCCTAAGGATGACACTAGACTGATCGGATACCGAGGATAGATCATAACAGGCCTCATTGAAAGATGGGTTTGGCATGTAGAAGTACATGTTACCATGAAGGAGTAGAGTATAATTTGTATAAATGCCAAGGGGGGCTTAGGGTAGCCTAGATACTATTATTTAGGAGTCGAGGTAGGGCGTTGCAAATACAAGCTATAACAATACTATTATAAAATAAATGAGCAACGTCTGGTGCAATACTGCGAAAACTTCCAAATAAGACGCTAAGCTGAATTGAGGACTCTATCTAACCACATAATAGGTGGTTTCACTGTAAGTTCAGTTCGGGGAATGACACGTAGCTGTAGATCGGGCCAACAGGGACCGAGCAGCTGCCGTGAGTTTCAGTTATAGAGATACGGGTCTTTTTCGTTCAAACCGCGTTTTAGAAAGCTTTGTTATGTCGAGAACTAGTCGACGGTACAAGCCTTTGCAGGCGAATAACGATGCTCTCCCTGGTTGCAACTCGGTTCGGATGCCCCGTGCTCGGGTACTGGTCTTCTGTCTCTTGGGTGTGCTGACTCTTGCTATGGTGTTGGGCTTGTATTTGTCCAACGAAACAAGCAGCAACCGCAACAACAGAATCCCCGTCGTAGATTTGGCAAAAGACCGGTTATCCCATAAGGCCAGTAAGTCTTCTCCATCCCAAGTGCGACGGCTGGTGTCCCAGGTAGACGGATCACGCCTGTGGGAGACTCACCTTAGGCCCATCCTCATTGAGAGACTCCCAGGAACCCTGGGCAGCCAGGCCGTACGCCAACACATCTCCTCCACCTTGTCCTCCCTCTCCGCTGGCTGGACAGTAGAACTCGACTCTTTCCTGTCGCCAACGCCTCGGGGTCAGGTCACTTTCTCCAACATCGTTGCGACCCTTGACCCCGGGGCCCCTCGCAGGCTGCTGCTGACCTGCCACTATGACTCCAAGGTCCTACCCCCGGACCCACGGGTCCCGGAGAGGGTGTTCCTGGGGGCCAGCGACTCAGCGGTGCCCTGTGCCATGATCCTGGAGCTGGCTTCTGCCTTGGACGCCCAGCTCAAAGCTCTCAATCAGCAGGCATCTGCTGTAACCCTCCAGCTAGTGTTTTTTGACGGAGAAGAGTCGTTTGAGGAGTGGACAGCCACAGACTCTCTCTATGGATCAAGGCACCTGGCAGAGCGCATggcacacacaccccacccactaggctccacacacaccaacctgcTGCAGGCTGTGGATCTCTTTGTTCTACTGGACCTGCTTGGTGGTCCAGACCCTTTGATTGTAAATCACTTTGACAACACTGCCCGCTGGTTTGACCGTCTCATCGCTGCAGaGAAGAGGCTGCACAGGCAGGGTCTGTTGACCTCTCACCCCTCTGAGCAGACCTACTTCAGGAAGGACGTGTACCTGGGCCCTGTGCAGGATGACCACATTCCCTTCTTACATAAAGGTGTTCCTGTGCTTCATGTCATTGCCACCCCCTTCCCCCCATTCTGGCACACGCTGGATGACACGGAGGAGAACATGCACCGACCCACAGTGGAAAACCTCACCAAGATCCTGGCTGTGTTCCTGGCCGAGTACCTGGGCTTTTAACCACACCTGGACCCACCATTGGACTGGTCCCATAACCCGAGAACCAACAGATTACATGGGACACCTTTTAACCACAGTGTAGGAAATACAGACAGGGGTTTGGGGCAGTTTTGCCCTGACGTTGCAAAAGACTAGGAGAGATAATGTTCCTGTGTCACTGGACAGGTTCTATCCACTGAAACCAACACTCATAGACACATTGATCTGAGAGCAGAACTACCATCAAGTGATCCTGCTGGATGTTGGCAGCTTGTATCACAGAAAAACCTTGATGGTACATGTTCATGAAAAATAACTGGAAGAGGCCTTTGTGGATTTTAATATTCTCATCACCTCTTTTTTTTAAGTCTTAAGGTAACACTACTAACCTAATCTTTTCTTTATGCTATATGGTCCTCTGTTGTGATTTTCCAACACTCAGTGAATATCAGACTGTAGACTTGATTTCATGCCATAAGCTCGTTGAGCTGACATTGACGGTTGTATTCACAGAGCATGGCAGTGACCGAAAAAACTTGAACATAACAATGAATGACATTGAAATGGTTGTCCCATCACTGGATATCTTCTGTATGCATTACCTCTCCCCAAGAGGTTTCCGGCCCAGGCTTGGTTTAGCATGTCATCTGTCTCACATCTTACCAGAGTGCTGATTTCAAAAACGGCTTCAATCAGAGAAGGTGCTGGGCGAAAATAAGCTGGATAAGAACACAGCTGAATCAAAAGTGTCAGTCTGAATCTAAATAGGCCGGATTGCCTCTGCGGGAGGCAGGCAGCTTGCGTGCACACACTGGATGATGTTGTTTAAGCTCAGTGAATAGGAATCATCTCACACCCGTCCCtatgggacatacagtgggagaGGCTGTGTGCTTGTTCTGGCTGTACTAACATTTGGCCGTGGTTTCTCTCAGCTGcaacctgggttgtgttcaggaAGCATGATATGGGAGCACATTTTTTTTCAAACCATATTGTTTATTCCCAAATGCTTCAAGTGCTTGTCAATGATTAGGTCTGATGACACATTTGTGTTTTCAATTaaactatttaaaaaatg
>XM_021587393.2
CGTCACTGTCAACGAAAACCCGGAAATCAGGCACCAAAAAAAGCAAGTTGTGTTGCGTTATCAGTGGATTCGATTACTTCAGTTGGGTGAGAAGCTACAGAACCACGTTAGTTACAAACCACGTTAGTTGCTGCATCTACCTATTGAAAATAAAAGCCGAAATCAGGTGTAAGACATTTGAGGACAACGGATTTCTAGATAAGGAAGAGTAGCCTAACCATCGATAGATTCATGATATCGATAAATGTTCAACTCCAATGAAGCAAGCCTAAGGATGACACTAGACTGATCGGATACCGAGGATAGATCATAACAGGCCTCATTGAAAGATGGGTTTGGCATGTAGAAGTACATGTTACCATGAAGGAGTAGAGTATAATTTGTATAAATGCCAAGGGGGGCTTAGGGTAGCCTAGATACTATTATTTAGGAGTCGAGGTAGGGCGTTGCAAATACAAGCTATAACAATACTATTATAAAATAAATGAGCAACGTCTGGTGCAATACTGCGAAAACTTCCAAATAAGACGCTAAGCTGAATTGAGGACTCTATCTAACCACATAATAGGTGGTTTCACTGTAAGTTCAGTTCGGGGAATGACACGTAGCTGTAGATCGGGCCAACAGGGACCGAGCAGCTGCCGTGAGTTTCAGTTATAGAGATACGGGTCTTTTTCGTTCAAACCGCGTTTTAGAAAGCTTTGTTATGTCGAGAACTAGTCGACGGTACAAGCCTTTGCAGGCGAATAACGATGCTCTCCCTGGTTGCAACTCGGTTCGGATGCCCCGTGCTCGGGTACTGGTCTTCTGTCTCTTGGGTGTGCTGACTCTTGCTATGGTGTTGGGCTTGTATTTGTCCAACGAAACAAGCAGCAACCGCAACAACAGAATCCCCGTCGTAGATTTGGCAAAAGACCGGGTGCGACGGCTGGTGTCCCAGGTAGACGGATCACGCCTGTGGGAGACTCACCTTAGGCCCATCCTCATTGAGAGACTCCCAGGAACCCTGGGCAGCCAGGCCGTACGCCAACACATCTCCTCCACCTTGTCCTCCCTCTCCGCTGGCTGGACAGTAGAACTCGACTCTTTCCTGTCGCCAACGCCTCGGGGTCAGGTCACTTTCTCCAACATCGTTGCGACCCTTGACCCCGGGGCCCCTCGCAGGCTGCTGCTGACCTGCCACTATGACTCCAAGGTCCTACCCCCGGACCCACGGGTCCCGGAGAGGGTGTTCCTGGGGGCCAGCGACTCAGCGGTGCCCTGTGCCATGATCCTGGAGCTGGCTTCTGCCTTGGACGCCCAGCTCAAAGCTCTCAATCAGCAGGCATCTGCTGTAACCCTCCAGCTAGTGTTTTTTGACGGAGAAGAGTCGTTTGAGGAGTGGACAGCCACAGACTCTCTCTATGGATCAAGGCACCTGGCAGAGCGCATggcacacacaccccacccactaggctccacacacaccaacctgcTGCAGGCTGTGGATCTCTTTGTTCTACTGGACCTGCTTGGTGGTCCAGACCCTTTGATTGTAAATCACTTTGACAACACTGCCCGCTGGTTTGACCGTCTCATCGCTGCAGaGAAGAGGCTGCACAGGCAGGGTCTGTTGACCTCTCACCCCTCTGAGCAGACCTACTTCAGGAAGGACGTGTACCTGGGCCCTGTGCAGGATGACCACATTCCCTTCTTACATAAAGGTGTTCCTGTGCTTCATGTCATTGCCACCCCCTTCCCCCCATTCTGGCACACGCTGGATGACACGGAGGAGAACATGCACCGACCCACAGTGGAAAACCTCACCAAGATCCTGGCTGTGTTCCTGGCCGAGTACCTGGGCTTTTAACCACACCTGGACCCACCATTGGACTGGTCCCATAACCCGAGAACCAACAGATTACATGGGACACCTTTTAACCACAGTGTAGGAAATACAGACAGGGGTTTGGGGCAGTTTTGCCCTGACGTTGCAAAAGACTAGGAGAGATAATGTTCCTGTGTCACTGGACAGGTTCTATCCACTGAAACCAACACTCATAGACACATTGATCTGAGAGCAGAACTACCATCAAGTGATCCTGCTGGATGTTGGCAGCTTGTATCACAGAAAAACCTTGATGGTACATGTTCATGAAAAATAACTGGAAGAGGCCTTTGTGGATTTTAATATTCTCATCACCTCTTTTTTTTAAGTCTTAAGGTAACACTACTAACCTAATCTTTTCTTTATGCTATATGGTCCTCTGTTGTGATTTTCCAACACTCAGTGAATATCAGACTGTAGACTTGATTTCATGCCATAAGCTCGTTGAGCTGACATTGACGGTTGTATTCACAGAGCATGGCAGTGACCGAAAAAACTTGAACATAACAATGAATGACATTGAAATGGTTGTCCCATCACTGGATATCTTCTGTATGCATTACCTCTCCCCAAGAGGTTTCCGGCCCAGGCTTGGTTTAGCATGTCATCTGTCTCACATCTTACCAGAGTGCTGATTTCAAAAACGGCTTCAATCAGAGAAGGTGCTGGGCGAAAATAAGCTGGATAAGAACACAGCTGAATCAAAAGTGTCAGTCTGAATCTAAATAGGCCGGATTGCCTCTGCGGGAGGCAGGCAGCTTGCGTGCACACACTGGATGATGTTGTTTAAGCTCAGTGAATAGGAATCATCTCACACCCGTCCCtatgggacatacagtgggagaGGCTGTGTGCTTGTTCTGGCTGTACTAACATTTGGCCGTGGTTTCTCTCAGCTGcaacctgggttgtgttcaggaAGCATGATATGGGAGCACATTTTTTTTCAAACCATATTGTTTATTCCCAAATGCTTCAAGTGCTTGTCAATGATTAGGTCTGATGACACATTTGTGTTTTCAATTaaactatttaaaaaatg

Function

NR:

description
glutaminyl-peptide cyclotransferase-like protein isoform X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K00683 QPCT; glutaminyl-peptide cyclotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587392.2 False 2945 mRNA 0.48 7 6217939 6223022
XM_021587393.2 True 2909 mRNA 0.48 7 6217939 6223022

Neighbor

gene id symbol gene type direction distance location
LOC110507407 sipa1l3 coding upstream 10372 6112520 ~ 6207567 (+)
LOC110507405 LOC106612492 coding upstream 152869 6028163 ~ 6065070 (+)
LOC110507404 cssa09h19orf47 coding upstream 196702 6012401 ~ 6021237 (+)
LOC110507403 fosb coding upstream 210555 6002715 ~ 6007384 (+)
LOC110507400 LOC106612489 coding upstream 224756 5959997 ~ 5993183 (+)
LOC110507411 tbcb coding downstream 17458 6240480 ~ 6246883 (+)
LOC110507412 clptm1 coding downstream 24593 6247615 ~ 6265219 (+)
LOC110507416 NA coding downstream 72816 6295838 ~ 6324480 (+)
LOC110507414 relb coding downstream 111310 6334332 ~ 6341809 (+)
LOC110507417 NA coding downstream 306733 6529755 ~ 6569243 (+)
G2045277 NA non-coding upstream 206047 6007974 ~ 6011892 (+)
LOC110507399 LOC106612489 non-coding upstream 262495 5930768 ~ 5957003 (+)
G2045273 NA non-coding upstream 264893 5951704 ~ 5953046 (+)
G2045272 NA non-coding upstream 266587 5951051 ~ 5951352 (+)
G2045268 NA non-coding upstream 281299 5936339 ~ 5936640 (+)
G2045391 NA non-coding downstream 2166 6225188 ~ 6226090 (+)
G2045453 NA non-coding downstream 126824 6349846 ~ 6350342 (+)
G2045506 NA non-coding downstream 229010 6452032 ~ 6452234 (+)
G2045520 NA non-coding downstream 269072 6492094 ~ 6492423 (+)
LOC110507398 znf296 other upstream 310700 5897208 ~ 5910058 (+)
LOC110507397 sfr16 other upstream 321826 5874691 ~ 5896127 (+)
LOC110507374 spa17 other upstream 1525067 4685868 ~ 4692872 (+)
G2043193 NA other upstream 1811813 4405458 ~ 4406126 (+)
G2040882 NA other upstream 3379012 2834096 ~ 2838927 (+)
G2045522 NA other downstream 271811 6494833 ~ 6495134 (+)
G2045655 NA other downstream 469522 6692544 ~ 6693044 (+)
G2045665 NA other downstream 496742 6719764 ~ 6720692 (+)
G2046345 NA other downstream 1022784 7245806 ~ 7251575 (+)
G2046384 LOC106612398 other downstream 1033609 7256631 ~ 7258230 (+)

Expression


Co-expression Network