bmp16 (LOC106612383)


Basic Information

Item Value
gene id bmp16
gene name LOC106612383
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6456398 ~ 6467347 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587404.2
agagagagaggaaaagggaaaaaggggaggagagacaaaaagagaatgagagacaacgaaagagaggaagggaaagagacacATTTCGGAAGCTGGGGACCAGAGGGAATTTTTTGCCGGTTACAGAATAGTCTCCAGACTAATTTGTCTTGTGCAGGTCCATACAGTAGATAAATTGCGTGTAtatttgtctctctgtgtctgagcAGAGGTGGAAGTGTcggcgacagagagagggagttgcCTGTTTGaagaggtcaggcaggcaggggaaAGCCGGTGGATATGTTTTAAGAGGCCGCTTATCTGAAACTGACAACAGGATGAGAGGGTGAGTGAGGGGGGAGAGCCCAGCAGTACagggggagaaccatggagagtaCACCGTCCTCATTCACAGCCCACTCAcagaggacacacagacacaggctaacctgagagagagagagaagcagagatagagggaaagaaagagagggaaagagtctACTTTGTCCACTCTGTCCGACCGAGTGGGAGCGAGAGGCGAGGGTTCGTAACACTGGAGCTCAAGGATAAACCATGGACTCTGCACACCTCTTACCACGCCTGGACATCCACCATGTTCCCTGCTAACCTCTTGGTCCTGATGGTCCTGCTGCTACCTCAAGCCTCGTCTGGTCGCCAGGGCGGAGCCACCGAGCCCGATGGTAGTGTGTCGTCGTTGTTATCGTCATCACCAACCCCCCTGGACCCTAGCCTGGCCCAGACCATCCAGAACCTGCTGCTGAGCCGCCTGGGCCTGCAGTCCCACCCCAACCCCCGGCCAGGTGCCCCCGTCCCACAGTACATAGTGGACCTCTATCGCTTCCACTCCCAGCAGTACCACCTAGTCCAGGATCCACACTTCAGCTACCCCAGCCAGCATGTCCAGGAGGCCAACACCGTGCGCAGCTTCCACCACACAGagtcTACCAGTCCCTCACTCCCCCTTGAAAAGAGGCAGACCACCGCGAGCAACAACAGGGTCCCCATCTCCTTCAACGTGTCGTCCATCCCCCAGGATGAGCGTGTGGTGTCTGCAGAGCTACGTTTCTTCCGGGGTGGTGGGGCCAGCCCGGGCCCTGGGGCCCACAGGGTCAGCCTGTTCCTCTCTGGAAGCCCTGGGGACTCTGAGTCTGAGCCCACTCTGCTGGAGTCACGGGTCCTCACACGGGCCCCCAACACCAAGCCAGCTGTCTCCTGGGAGGCATTCAGCCTCAGCACCGAACTCTTTCTGGGGGCCCACGCTCAGACTGGGAGCCTTTCCTTCCTCCTGGAGGTGACCCCTCTGGGTAACACCACCCTCCTCACCCCCCCTGACCATGATGCTTTACCACCTTCCACTGGGGAGGAAGGACGAAGAGTGGGACACCTGAGGGTGCGCAGATCTCTGGGACAGGACGAACACAGCTGGGCACGAGAGAGACCCCTGCTGGTTACTTACAGCCATGACGGGCGTGGGGAGGCACTAGCCGCCCATGTCCGGAGAACCTCTGGCACTGCCCAGAGgatgagggggaggaagggggccAGAGAAAGGGGCAGGAGTAGCAGCAGCAACCGGGGAAGGGACAGAAacaaggacagggagagggacaatGACCGGAGTGCCAGCCCTGGCTGGGGCAGTAGCTGGGACGAGGGTGGAAGAGTGAAGCGTAATGGTGGCCGCGCAGCAAAGCTGAAGCGTCTGTCCCGCACCCGCTGCCGCCGCCACCCACTCTACGTGGACTTCAAAGACGTGGGCTGGAACAAGTGGATCGTGGCGCCTAGCGGCTACGACGCCTTCTTCTGCCTGGGGGAGTGTCGCTTCCCGCTCGCCGACCACATGAACTCATCCAGCCACGCCATGGTGCAGACGCTGGTGAACTCGGTGAACGGAGCCGTGCCGCGGGCCTGCTGCGTGCCCACCGCCCTCAGCCCCATCGCCATGCTCTACCTGGACCCGCAGGACCGCGTGGTGCTCAAAAACTACCAGGACATGGTGGTGGAGGGCTGTGGATGCCGGTGACGGGAaacaaaagagaggagagggaggagagagatggaaggagagattgATGGCGTAAAGACAGGGGGCAAGGACAGAACCCAGCCCAGCAGGACCACGTGAAACAAGAGGACCTGGATCTTGTGGCGGAGGGATGCAAATACTAGTACTAGCGGGGGGCCGGCAAGATGGATGAGGCAGGAAGAGAAGAGACGGGAATGTAGAACCCAATCCAGCAGGAACAAGTGCTTTCTAAGAAGTGCGTGGTGTCGGAGGGCCACAGCTGTCGGTAGTGGAAATAAAGAGGAGTAGAAAGAgcggagaagaaagagagagggagagagatggaaagagagagagagagaggacaaacagagacagaggagccCCCTTAGGACACACAGTGCAGTGCTTCAGAAGTACCACACAGTGAGAGTAtgaagagaagacagagggaaTGACGGAGAGAAATAACGAAGCAGTCTTCCACATCCCGGTAGGGGAAGAGGATGCTGCTGACAGGAGAAGAGGGGAACGACAGCcaggagtagaggagaagataatCCTCCCATTagccccacctcctctccttcaatAGCACTCCACTCGCTGACAGCCCTGTGCTTGTTCAGTGCTCCCTCGCCAGCCCTCTACGTGTCTGTAACGTGTCTGTGTCTATCCGTGCTTAGTGTGTCGCTCACCTCCTTCCAGCATCAATCTGTAAAGGAGACGCACTCAATCAGTGGAGTGGAAGGGGACTGGCAAGAGATGAAGATATCAGTGCCAGAGTATACTATCTGTACGGTTGGACATCAATAGTGGCTTATAGTACAGAGACAGCTGTCATGTGGCCCATATGAGGAGGATGATACATATAGCCTTTGCATCAGTTGACACCATCCTCAAACTAACTCGGCTAACTTGTCTGGGCCAACGGACAGCTACTGACCTCTCATCAAGAGAGATGTTGACGGACACTCCTCGCAGACTGAATAGATATGGATTTttcgcagacagacagacatgaatcTTCCCGTCatgagatatatattttttaaaccacaACAATAATACAGAGGAATTATTATGCTATTGTTTGAATGTACTACTATCATTATTATTTAAAGATAACTTGTTGTTGTACATTTCCTTTGCAGAGATTAAGAAAATTCAGAAAACCGTTGTCATCAAAGTAATTCCATTAAATGGTAAATCTAACTTAACGAGTCACATTAGGTATTTAAATAGCAACCACATATTGTGTATTTAACCTTGAAAATATTTAAGATATCTGCTCTCTACAAAGCCACATGTACAGTACCGTAATACACCTAAAACCTGCGGCCCTTATAGTAGCTTTGGTACAGCAAGTTATGGTGGCTTTTGGTGTACTatacatacaaaaacacagtgttgtaatgatgcaGTCATAAGCTCAAGAAATGCCACATATCAAGGCTCTGTGTATTGTATTCTACTGAATCGTGTAACAAGAACACAATGTCATCGTCGAACACAGATGTCTTTGCTGGAGgtgtgcatgtttttttttaaagagcggCTAATGTTAAAGCAGTTGATTTCCAGTGCCTTTTGGACGAGGGCTTTGCAGGTGTTCTCCTGTTATGAGTTGAACATTTTGAGTATCTTTCCAGCATTTTTGGTTTTCCCTCTATTTAAATGGAAGCATTTAAACAACAGTCTGTAAAATGTTTGACATTGTCTGAAAACGTGATGATACCTGTAATAAACAGACCAAGCAGCA

Function

NR:

description
bone morphogenetic protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587404.2 True 3776 mRNA 0.52 3 6456398 6467347

Neighbor

gene id symbol gene type direction distance location
LOC110507413 ppp1r37 coding downstream 36686 6367043 ~ 6419712 (-)
LOC110507422 LOC106612386 coding downstream 93077 6358173 ~ 6363321 (-)
trnastop-uca-4 NA coding downstream 103989 6352323 ~ 6352409 (-)
LOC110507420 mrpl28 coding downstream 104499 6349144 ~ 6351899 (-)
LOC110507423 NA coding downstream 122121 6331277 ~ 6334277 (-)
LOC110507421 gemin7 coding upstream 22357 6489704 ~ 6491119 (-)
LOC110507418 NA coding upstream 34437 6501784 ~ 6512110 (-)
ptgir ptgir coding upstream 143099 6610446 ~ 6672160 (-)
LOC110507427 NA coding upstream 221174 6688521 ~ 6694030 (-)
LOC110507428 LOC106612376 coding upstream 226818 6694165 ~ 6704533 (-)
G2045878 NA non-coding downstream 191190 6263157 ~ 6265208 (-)
G2045879 NA non-coding downstream 209522 6245005 ~ 6246876 (-)
G2045869 NA non-coding downstream 230509 6225187 ~ 6225889 (-)
G2045715 NA non-coding downstream 389870 6062148 ~ 6066528 (-)
G2046000 NA non-coding upstream 28913 6496260 ~ 6496468 (-)
G2046009 NA non-coding upstream 51128 6518475 ~ 6518688 (-)
G2046014 NA non-coding upstream 57589 6524936 ~ 6525187 (-)
G2046021 NA non-coding upstream 67959 6535306 ~ 6535568 (-)
G2046022 NA non-coding upstream 68337 6535684 ~ 6536012 (-)
LOC110507410 LOC106612495 other downstream 220876 6228113 ~ 6235871 (-)
G2045223 LOC106612485 other downstream 586259 5868575 ~ 5870139 (-)
kmt2a kmt2a other downstream 914765 5531877 ~ 5586139 (-)
G2043518 NA other downstream 2041975 4414065 ~ 4414423 (-)
G2043483 NA other downstream 2076969 4378934 ~ 4379429 (-)
LOC110507058 egln2 other upstream 525036 6992367 ~ 7028249 (-)
LOC110507059 dscaml1 other upstream 714738 7182085 ~ 7411701 (-)
fxyd6 fxyd6 other upstream 975326 7442657 ~ 7468560 (-)

Expression


Co-expression Network