LOC110507421 (gemin7)


Basic Information

Item Value
gene id LOC110507421
gene name gemin7
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6489704 ~ 6491119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587407.2
AGAGTGACAAAAAGTCGAAATGAGACCACATGTATCTGTGCTTCGCCTCCCGAGAGGACCTGATCCGAATGGCCGCGGATTCGACCCGAACTCACCCCGTTTCATCGCGCTGTGTCCAACTACTATTTCAGCTTCGACTGAAACAGGGACCGACTCAGTCCAAATGAGAGAAGAGCAGCGTGCACGGTCGGTTTTGAGAGAAAGCTTCCTGAGAACGCTCATAGCCATGACCAACAAGCAGGTGCAATTCCACATGTACGAGAGAGTCAAGGTTGAGGCCAAGTTTGGAGCTTCGGACATTGACGTGCTCAACTTCCAAGTTTCAGAACTGCATACCCCCATTGGGGTGCAAAAAGAAGCTCTGCTCAGATGTCAGGATGTCATTTCATATTCCTTTGATCTCTGAACAGTGCTGTTCACCAATTTGTGATGTTCAGTGCTGTTCACTTAATTGTGATGTTTTTGAACAGATGTCCAAGAAATCCGATTTGAACTGTTATTTTTAATATGATTTCGTTTCACATACAGGGTGTTTTGGGAGAGTGATAACTGTTCCATTGCTACACAGGGTGTTCTGTCTGGCTGAATATGTAGCAAGCTGTTTCCATGTATTATTCTGTTACTTTGAGTATGAGGGAGACTTGCCATTGCCATATGTTTTTTTATGTGGCCAGCCAGGTATTGAGAACTCTGATATACAGTCTATGATTAGATTTTTTCATCGTTTCCTATTCATTGTACCTCCACTGGAGGGAGATGTCAGCACTGTCTTTGCAACAGACATGTCAGGGGGCTCTTATACCACCAGGTTATCTGACACTCAGCAGTTCTCGGCTGTCCAGTCCATTTCATTAGGAAGAGACGAGGACGCATGTCCGCAGGTGGAATTTGGATTGAATTGTCTGGCAACCTGAAAATCTTGGCATTGTTCCTTGAGTATAGGACAATGTGGTTCTTGTCTTGTTCCTTCTGATAAGATCTGTTGCTGAGATATGTTTGTTTACCACTGAAGCCTATTACATTGTCAACGGGCATGTGCACTTTGTTTTTTTTTCTACTTTGAATAAACATTTTTGTCACTTGCG
>TU2340414
ACAAAATGTACGCGTACCAACTCAAACGGCACTCATAAAACGTACTCCTTTGCCAACTTCAAATATAATCTTCGTACTTTGAGTCGAGAGTGACAAAAAGTCGAAATGAGACCACATGTATCTGTGCTTCGCCTCCCGAGAGGACCTGATCCGAATGGCCGCGGATTCGACCCGAACTCACCCCGTTTCATCGCGCTGTGTCCAACTACTATTTCAGCTTCGACTGAAACAGGGACCGACTCAGTCCAAATGAGAGAAGAGCAGCGTGCACGGTCGGTTTTGAGAGAAAGCTTCCTGAGAACGCTCATAGCCATGACCAACAAGCAGGTGCAATTCCACATGTACGAGAGAGTCAAGGTTGAGGCCAAGTTTGGAGCTTCGGACATTGACGTGCTCAACTTCCAAGTTTCAGAACTGCATACCCCCATTGGGGTGCAAAAAGAAGCTCTGCTCAGATGTCAGGATGTCATTTCATATTCCTTTGATCTCTGAACAGTGCTGTTCACCAATTTGTGATGTTCAGTGCTGTTCACTTAATTGTGATGTTTTTGAACAGATGTCCAAGAAATCCGATTTGAACTGTTATTTTTAATATGATTTCGTTTCACATACAGGGTGTTTTGGGAGAGTGATAACTGTTCCATTGCTACACAGGGTGTTCTGTCTGGCTGAATATGTAGCAAGCTGTTTCCATGTATTATTCTGTTACTTTGAGTATGAGGGAGACTTGCCATTGCCATATGTTTTTTTATGTGGCCAGCCAGGTATTGAGAACTCTGATATACAGTCTATGATTAGATTTTTTCATCGTTTCCTATTCATTGTACCTCCACTGGAGGGAGATGTCAGCACTGTCTTTGCAACAGACATGTCAGGGGGCTCTTATACCACCAGGTTATCTGACACTCAGCAGTTCTCGGCTGTCCAGTCCATTTCATTAGGAAGAGACGAGGACGCATGTCCGCAGGTGGAATTTGGATTGAATTGTCTGGCAACCTGAAAATCTTGGCATTGTTCCTTGAGTATAGGACAATGTGGTTCTTGTCTTGTTCCTTCTGATAAGATCTGTTGCTGAGATATGTTTGTTTACCACTGAAGCCTATTACATTGTCAACGGGCATGTGCACTTTGTTTTTTTTTCTACTTTGAATAA

Function

symbol description
gemin7 Predicted to be part of SMN-Sm protein complex. Orthologous to human GEMIN7 (gem nuclear organelle associated protein 7).

NR:

description
gem-associated protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587407.2 False 1085 mRNA 0.44 1 6489704 6490788
TU2340414 True 1153 TUCP 0.44 2 6489722 6491119

Neighbor

gene id symbol gene type direction distance location
bmp16 LOC106612383 coding downstream 22357 6456398 ~ 6467347 (-)
LOC110507413 ppp1r37 coding downstream 69992 6367043 ~ 6419712 (-)
LOC110507422 LOC106612386 coding downstream 126383 6358173 ~ 6363321 (-)
trnastop-uca-4 NA coding downstream 137295 6352323 ~ 6352409 (-)
LOC110507420 mrpl28 coding downstream 137805 6349144 ~ 6351899 (-)
LOC110507418 NA coding upstream 10996 6501784 ~ 6512110 (-)
ptgir ptgir coding upstream 119658 6610446 ~ 6672160 (-)
LOC110507427 NA coding upstream 197733 6688521 ~ 6694030 (-)
LOC110507428 LOC106612376 coding upstream 203377 6694165 ~ 6704533 (-)
LOC118944637 NA coding upstream 266847 6757635 ~ 6760305 (-)
LOC110507423 NA non-coding downstream 155478 6331277 ~ 6334277 (-)
G2045878 NA non-coding downstream 224496 6263157 ~ 6265208 (-)
G2045879 NA non-coding downstream 242828 6245005 ~ 6246876 (-)
G2045869 NA non-coding downstream 263815 6225187 ~ 6225889 (-)
G2045715 NA non-coding downstream 423176 6062148 ~ 6066528 (-)
G2046000 NA non-coding upstream 5472 6496260 ~ 6496468 (-)
G2046009 NA non-coding upstream 27687 6518475 ~ 6518688 (-)
G2046014 NA non-coding upstream 34148 6524936 ~ 6525187 (-)
G2046021 NA non-coding upstream 44518 6535306 ~ 6535568 (-)
G2046022 NA non-coding upstream 44896 6535684 ~ 6536012 (-)
LOC110507410 LOC106612495 other downstream 254182 6228113 ~ 6235871 (-)
G2045223 LOC106612485 other downstream 619565 5868575 ~ 5870139 (-)
kmt2a kmt2a other downstream 948071 5531877 ~ 5586139 (-)
G2043518 NA other downstream 2075281 4414065 ~ 4414423 (-)
G2043483 NA other downstream 2110275 4378934 ~ 4379429 (-)
LOC110507058 egln2 other upstream 501595 6992367 ~ 7028249 (-)
LOC110507059 dscaml1 other upstream 691297 7182085 ~ 7411701 (-)
fxyd6 fxyd6 other upstream 951885 7442657 ~ 7468560 (-)
G2046935 NA other upstream 1014931 7505719 ~ 7510925 (-)

Expression


Co-expression Network