LOC118944637


Basic Information

Item Value
gene id LOC118944637
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6757635 ~ 6760305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964628.1
ATGCCGCCCTGGATCCTCTCCAAATGCTACCACTGCGTCATGACCAGTTGCATCATGGTATGTATGGGACATTTCTCCATCCACAACCGCAAGGCCCTCCAGTGGGTGGCGAAGATGGCCCAGTACACGACTGGGACCGCACTTCCACTCATCCAGAACATCTACTCGAAACGCTGCCTGAGGAAGGCACGCAGCATCATCAAGGGCCCCACACAACccccagccacgagctgttctCTCCCCTACTCAGACCCCTCACCTCCCCATAGACGTCCTCACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAGATCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAGATCTCCCTACACAGAAACCTACCTACACAGAGACCTCCCTACACAGAGACCTCTCTACACAGAAACCTACCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACTGAGATCTCCCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAAAACTCCCTGCACAGAGACCTCCCTACACAGGAACCTCCCTACACAGAGACCTCCCTACACAGACCCCTCACCTCCCCATAGACGTCCTCACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAAACCTACCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAGACATCCCTACACAGAAAACTCCCTACACAGAGACCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAGACCTCCCTACACAGAAACCTCCCTCCACAGAAACCTCCCTCCACAGAAACCTTCCTCCACAGAAACCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAAACCTCCCTACACAGAAACCTCCCTCCACAGAAACCTCCCTCCACAGAAACCTCCCTCCACAGAAATCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAGGCCTCCCTACACAGAGACCTCCCTACACAGAGACCTCCCTCCACAGAAACCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAGGCCTCCCTACACAGAGACCTCCCTACACAGAAACCTCCCTACACAGAGACCTCCCTACACAGAGGCCTCCCTACACAGAGACCTCCCTACACTGACCAGTAGAGAGCCAGGATGGGTTAAGTGGCCATTTGGGCTCCATCCAAGCAGATGA

Function

NR:

description
PREDICTED: extensin-3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964628.1 True 1329 mRNA 0.55 2 6757635 6760305

Neighbor

gene id symbol gene type direction distance location
LOC110507428 LOC106612376 coding downstream 53102 6694165 ~ 6704533 (-)
LOC110507427 NA coding downstream 63615 6688521 ~ 6694030 (-)
ptgir ptgir coding downstream 85475 6610446 ~ 6672160 (-)
LOC110507418 NA coding downstream 245525 6501784 ~ 6512110 (-)
LOC110507421 gemin7 coding downstream 266847 6489704 ~ 6491119 (-)
ap2s1 AP2S1 coding upstream 51101 6811406 ~ 6816589 (-)
tmem160 tmem160 coding upstream 225335 6985640 ~ 6988182 (-)
LOC110507058 egln2 coding upstream 232062 6992367 ~ 7028249 (-)
LOC110507438 LOC106612392 coding upstream 343206 7103511 ~ 7108254 (-)
LOC110507441 LOC106612399 coding upstream 458315 7218620 ~ 7225752 (-)
G2046148 NA non-coding downstream 3701 6753719 ~ 6753934 (-)
G2046147 NA non-coding downstream 4116 6752923 ~ 6753519 (-)
G2046145 NA non-coding downstream 6519 6750722 ~ 6751116 (-)
G2046137 NA non-coding downstream 19868 6737537 ~ 6737767 (-)
G2046136 NA non-coding downstream 20548 6736849 ~ 6737087 (-)
G2046151 NA non-coding upstream 249 6760554 ~ 6760879 (-)
G2046156 NA non-coding upstream 6985 6767290 ~ 6767570 (-)
G2046159 NA non-coding upstream 15427 6775732 ~ 6776019 (-)
G2046639 NA non-coding upstream 99644 6859949 ~ 6907560 (-)
G2046680 NA non-coding upstream 168199 6928504 ~ 6928726 (-)
LOC110507410 LOC106612495 other downstream 522113 6228113 ~ 6235871 (-)
G2045223 LOC106612485 other downstream 887496 5868575 ~ 5870139 (-)
kmt2a kmt2a other downstream 1216002 5531877 ~ 5586139 (-)
LOC110507059 dscaml1 other upstream 421780 7182085 ~ 7411701 (-)
fxyd6 fxyd6 other upstream 682368 7442657 ~ 7468560 (-)
G2046935 NA other upstream 745414 7505719 ~ 7510925 (-)
LOC110507449 LOC106580720 other upstream 1043578 7803655 ~ 7904639 (-)

Expression


Co-expression Network