tmem160 (tmem160)


Basic Information

Item Value
gene id tmem160
gene name tmem160
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 6985640 ~ 6988182 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587426.2
TTGCACGGGAGCACCGCCTCCTTTCCGTATGTCGTTTGCAGTGTGAAAGTTCACAGGGCATGCAAAGGTCGTGTTGTGTTTTTAGCGAGCTATGGCTGCCTTGAGTTGGTTTACGTGCAGACAGCTGCCGCGTATTGCAAATCAGTTCGCCTGGGTTGTGAAGCACGTCAGGCCTCAGTACCTCGGGGGACTGCCGGTGAGGAGAGTCCACGGGTCGTCGCGGAAATGGGTGGCTGAGAAGGGGCCATGGGGCAAGGCTCGGATGCCAGAGTATCATCTTCTGACAGAACTCGATAAGGCGGATGCCTTGATGCTGAAAAAGTCCCACGAAACTGGGTTCCTGTCTTGGTTCCGGAACGGACTCCTGGCCACCGGGATCGGGGTCATCGCTTTCGTCCAGAGTGATGTGGGACGAGAGGCAGGATATGcctTCTTCAtcctgggtggtgtgtgtgtatcgtTCGGCGGGGCGTCCTACGTGGGCAGCCTGTTTTCGCTGAGGAGGATGATGCTTCTCTCCCTGCCTGCAGTGCTGCTGAATGTTGCTGTGGTGAGCAGCGTcgccctcttctggctgtgtgcGGTATCTCTCTACATCGGACGCCTGGAGGTGGAGATTATACATGAGGAGGACGAGGACGATGACGGAGAGGAGTGTCCAGACTGTCGGGACCGCGCCAACCACTCCCATGGCAACCGGCACCACGGCAGCAACAAAGGCCAAGACAAGTAGAGAGTGTGAGTGGCAAAGGtgacgaggtgtgtgtgtgagtgagtgagtgagagagaggactgagaggaagTGTGTATGACATTTAAAGAGATGGGGGGGAATAAAGGGGATCAGTGAAAGGCATGATGTATTTGGATGGTGGTGGTTTGCTGACCTCTGATATTAATCTGTGTGGGTGGGTGATTGTGTTAAATTTCTGGGATAAAGAGTTAATTTTTTGTTCATAATATCAATgttcgatttttttttttaaattgtagttTTATTTTGCACAGGCACTCTGTAAGAGTGCCTCGTTTGAGTTGATTTACTCCTGATCATGTTTACTTTATGAATCAAAGTGCCCTGTACAATTCCTAAGCCATACTCTGAGCCAGCTCATGCTGTGTTCACCTAAATATGGTtttgttgatgtaaaaaaaaaaaaactttaacaaTTATCAGTTTATTCTATATTTATTACGAAGGAGTACTTGGATTCTCTGTAGTAATCCATGCTGGTGATGTAGAATGAGGAGATGTAGCCCATGTTGCAGTGTTGAATGGATGAACTAGCGCTATGTGAATTTGCGATATAATGTATAAATACTGTAGGTAAGTAATCAGCAATGGTCTATATTTGTGTAATCGATTTTCTGTGTGTAAAAGTCTGGGTTTTTCTTATGCGTTCTGTATTTTAGATTGAGACGTTTCTTTTAACCCATAAAGGCTTTGGCTTAAAAAAAATTTCCAAAGGGTTTTGTGATTCAATATACTTTTGTCATAAAgcaaatgacaacaacaacaaaaaatgtcaaagTGCTATAAgttttaattatttttatttaaacatgTTCAATGCAATCTTGATAGTGGATTTCTATAGAGTAGTTTAGTTTTAACTGTAAAGTATCGTTATTTCATACCTTTACTCAATCGAGGCTTGAAAGCTGCAGCCACAACGTAATCAAAATTACCACCCTGAACCCCATGTCTTTTTGGAGAGATTTTAGTGAGAAACTATAACATTTGTTTAACCCGTGTGTTTGTATGAGATggacatttacagtgcatttggaaagtattcagaccccttgacttttcccacattttgttacgttacagccttattctaaaatatatatatattttaaatccccctcgtcaatctacacaatactccataataacaaagcaaaaacaggtttttagacatttttgcaaaaaaattgATAATTATTTTACACATTTGCATAAGCgttctgaccctttactcagtactttgttgaatcacctttggcagcgattacagcctcgagtcttcttgggtataagcttggcacacctgtatttggggagtttctcccattcttctctgcagatc

Function

symbol description
tmem160 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM160 (transmembrane protein 160).

NR:

description
transmembrane protein 160-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587426.2 True 2096 mRNA 0.43 4 6985640 6988182

Neighbor

gene id symbol gene type direction distance location
ap2s1 AP2S1 coding downstream 169051 6811406 ~ 6816589 (-)
LOC118944637 NA coding downstream 225335 6757635 ~ 6760305 (-)
LOC110507428 LOC106612376 coding downstream 281107 6694165 ~ 6704533 (-)
LOC110507427 NA coding downstream 291620 6688521 ~ 6694030 (-)
ptgir ptgir coding downstream 313480 6610446 ~ 6672160 (-)
LOC110507058 egln2 coding upstream 4185 6992367 ~ 7028249 (-)
LOC110507438 LOC106612392 coding upstream 115329 7103511 ~ 7108254 (-)
LOC110507441 LOC106612399 coding upstream 230438 7218620 ~ 7225752 (-)
LOC110507059 dscaml1 coding upstream 263619 7182085 ~ 7411701 (-)
LOC110507442 LOC106612730 coding upstream 448460 7436104 ~ 7442238 (-)
G2046710 npas1 non-coding downstream 13713 6970751 ~ 6971927 (-)
G2046706 NA non-coding downstream 25015 6960323 ~ 6960625 (-)
G2046702 npas1 non-coding downstream 34140 6951115 ~ 6951500 (-)
G2046701 NA non-coding downstream 34608 6950801 ~ 6951032 (-)
G2046700 NA non-coding downstream 35668 6949718 ~ 6949972 (-)
G2046745 NA non-coding upstream 87791 7075973 ~ 7076190 (-)
G2046749 NA non-coding upstream 92361 7080543 ~ 7080758 (-)
G2046685 slc1a5 non-coding upstream 100159 7088341 ~ 7088966 (-)
G2046688 slc1a5 non-coding upstream 108323 7096505 ~ 7096808 (-)
G2046753 NA non-coding upstream 113696 7101878 ~ 7102114 (-)
LOC110507418 NA other downstream 478059 6501784 ~ 6512110 (-)
LOC110507421 gemin7 other downstream 494521 6489704 ~ 6491119 (-)
LOC110507410 LOC106612495 other downstream 750118 6228113 ~ 6235871 (-)
G2045223 LOC106612485 other downstream 1115501 5868575 ~ 5870139 (-)
kmt2a kmt2a other downstream 1444007 5531877 ~ 5586139 (-)
fxyd6 fxyd6 other upstream 454491 7442657 ~ 7468560 (-)
G2046935 NA other upstream 517537 7505719 ~ 7510925 (-)
LOC110507449 LOC106580720 other upstream 815701 7803655 ~ 7904639 (-)

Expression


Co-expression Network