LOC110507469 (sertad3)


Basic Information

Item Value
gene id LOC110507469
gene name sertad3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9128031 ~ 9130735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587474.2
TGACTTATCAAACTCCGGCCTGGTCTGTttggtcagtattttggcaagagtgaaacctctcgcttcgcctcttctcTGGTGAAACTTAAATCTCGGGCGGGAACGAGTTTACTTTTTAGTTTGCCGGTGGGTTTTGTACGGAGCCGGCGAGCTAGGCAAACAAATAAGACATATTTGGACCTAACATAATTCATTACTTTTCTATATCGAAAAGATAGCTGAAGACAGATGAACAGTTGCACACAAcagCTAACTACGTTAGGtcgaggaggatgatgatgatatcCAAGGGACAGAAGCGCAAAGTCGATGATGTCGTGGGGGGCATGCGTAGCGGCACTTGGGACAGCCAGCGGCAGTCCGTGCTTGGCATCTCCCTTATCAAGTACCACCACGGGCAGGAGCTGATGGAGCCTAGTTTGCGCCGCTCCGTGTTGATAGCCAACACACTGCGGCAGATACACCTAGAAAACAAGCCTCCATATGGGTTAGTTAACCTGACAGGACCAGTGCCACCCATGGTCCCATCTAAACCCTGCacccacagggagtctggtctggGTGTTGTAAACAGTGCCTCAGGTGTCGAGGATGTCTGGATGTCCTCAGAGAGTGACTTCTCCCTGTCAGCTGCTGTCTCCTCCATTCTGAAAGAACTAGACTTGACTGTCGATAGAGGGCAGTCACCTCAGAGGACACCTTTCAGGTCCATTGAGAACCTACCTGGAGACCTGGGGCTCATACGGAGCTGGGTGGCTTTTGGTAGCGTGGAGGAGGTTGTgtgttccagctacctgcaggATGTAAAACTAGATGAACTTTTCCATGACATCGACACATCCGTGTTTGACAGGGAGATGGGGGTCCGAGCACTCTGCTGCAGCCAGTGACGAGCTGCTTAAGTACTTACCCTCTCTGTCCTCCGTTCCGTCCAGTTCacccgctctcttctctctcaaccAGAGCTTCAGGGACCTGCATGAGCTGGAGCACATCATGGAAATACTGGTAGAGTCTTGATCACCAGAACTTTGAGGAAATTAGGACATTATAAAGAGAACAAGACATTGAAATTGAGTGTTTACAGTTGATCACATGGTTTAATCAGTGAAATACTCTATTTTTATACAAAAGAAGAACAGGCTGAATGAGAGACTAGCCTATTTTTTCTAGTAGTGATGTTTTAAACGTAATATTCCTTATGCCTAGCTATATCAAGAGATTATATTGTAAGATGTTCCTAATAGCAAAGCAAGTTCAGACTGATGTCCAAGAAATTAATTAGTGGGTAGGTAGGATTGACTCGGTTGGAATTTTCGAATATCATTACATGCCTCAGGCATCTATTTAATTGAAGGTAGATGACCATTTTTTTTAATGTGTAAAAACATTAACCTGGTGGGAAATGACATCTTTGAAGAAATCCCCTTCACTGGTCTTACTCCAGTAAATAGAGGGTTAATATTTAACACATTCTCACATCCTTCAATATCACAAAAGTACAACTGAACTACAATAGTACTGCATTGTATTGGTCAATATGTTCTGTAGTAGTAGTCTAACTTGCTTAACCAGTATGCATAATTTGGCTACATATTGAGATGTGCCACTAACTTACAGCTTGCTTTGGCCATTAGGAAATACAAATATTACCTTAACCTGAGTTACTGGCTGTGAAATGTCATGGTGCTTACCAGTAGTTCAATATCAGGTTATAACAGCTGGAGTTAATATAGAGGAATTCCTCAGTTTGGTTCTGTTGTGCGTGCAATGATGTCTAAGGGGAAAAATAGTGTTTGCTTGCAGTAACTTGGTTGCAGTAATGTCCCAGACAGAAGTGTCAGTTTCATCATTAAGGGTTTTATTAAGGTCTATTGTGTGGCATTTTTAGAAAATGTCAAACCAGGGTCAGAAATGGTTCAAAGGATGAGTTATTTATAGAAAATTCCTATTTAAATGTCCAGCTAAATATGTGATCTATATGTTACACAATGGCagtttgtattttttatattctTGTTTATATAATGTATTTTGGCTCAATGCCCTGAAAAAGCAAATTATGCGGACATTTTTCAATGAAAGACATGTAAGTGCACTGTCAAATTTATGCAAACACAatgttaatattttttttatacattctaAAAATAAATGGGTTTGTGCCAATATTTTCAAACAATGACACTTGTCTCAACTgcgatacagtacagtagattcaCACCTTCGGTGGGGATCCTACTGCAGAACACCAGCAAGCAGCCAGAGAAAATACTCAACGTCCCGTTCTGACCCCAAGTGGACATTGTCAGAACAACGCAAGTGCCTCGCAACGATGCAAATGCAGGTGGAGTTGTGCTGTTGAATTGTTAAGGTGCATGTGAAAATGTCATACGTATGTAGTAACTGATAATGTAATAACTGCCCATAATGTAATCGCTGCTAATGTAATAACTTTtgcaataataatgtaataaatgCTAAT

Function

symbol description
sertad3 Involved in regulation of transcription, DNA-templated. Acts upstream of or within negative regulation of cell growth. Located in nucleus.

NR:

description
SERTA domain-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587474.2 True 2485 mRNA 0.42 2 9128031 9130735

Neighbor

gene id symbol gene type direction distance location
LOC110507468 blvrb coding upstream 1719 9123596 ~ 9126312 (+)
esrrd LOC106580735 coding upstream 84352 9036968 ~ 9043679 (+)
LOC110507061 ltbp4 coding upstream 94923 8958406 ~ 9033108 (+)
LOC110507459 LOC106580729 coding upstream 336218 8788596 ~ 8791813 (+)
si:cabz01090165.1 LOC106580728 coding upstream 386502 8606550 ~ 8741534 (+)
LOC110507063 hipk4 coding downstream 79019 9209754 ~ 9212063 (+)
LOC110507479 LOC106580747 coding downstream 141106 9271841 ~ 9273709 (+)
LOC110507484 LOC106580753 coding downstream 375750 9506485 ~ 9538992 (+)
LOC110507488 LOC106580752 coding downstream 466421 9597156 ~ 9619474 (+)
LOC110507489 LOC106580757 coding downstream 494179 9624914 ~ 9640110 (+)
G2048957 NA non-coding upstream 5851 9121768 ~ 9122180 (+)
G2048942 sptbn4 non-coding upstream 29745 9097438 ~ 9098286 (+)
G2048926 sptbn4 non-coding upstream 57909 9069826 ~ 9070122 (+)
G2048925 sptbn4 non-coding upstream 58731 9069042 ~ 9069300 (+)
G2048924 NA non-coding upstream 59287 9068497 ~ 9068744 (+)
G2049072 NA non-coding downstream 4820 9135555 ~ 9139211 (+)
G2049089 NA non-coding downstream 24686 9155421 ~ 9156365 (+)
G2049091 NA non-coding downstream 30913 9161648 ~ 9161987 (+)
G2049095 NA non-coding downstream 39714 9170449 ~ 9170649 (+)
G2049073 pld3 non-coding downstream 81615 9212350 ~ 9224788 (+)
G2046384 LOC106612398 other upstream 1869801 7256631 ~ 7258230 (+)
G2046345 NA other upstream 1876456 7245806 ~ 7251575 (+)
G2045665 NA other upstream 2407339 6719764 ~ 6720692 (+)
G2045655 NA other upstream 2434987 6692544 ~ 6693044 (+)
G2049339 LOC100380674 other downstream 276890 9407625 ~ 9408571 (+)
G2049657 NA other downstream 657071 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 1148375 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 1258266 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 1275638 10391240 ~ 10417311 (+)

Expression


Co-expression Network