LOC110507063 (hipk4)


Basic Information

Item Value
gene id LOC110507063
gene name hipk4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 9209754 ~ 9212063 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021586943.2
ATGAGAGATATCTATTCTGAAACTGAAGTCTACCACACTTTGGATGTAGTGGGAAAGGGTACCTTCGGAAAAGTGTCAAAATGCTGGAGAGGGAGTGACGGAGAATTAGTGGCGGTAAAAATGATGAAAATGGATGTTCACAGAAATCGAGTGATAAAAAATGAATTAAAACTTTTAAGTGCTCTTTCCCGGAATAATTTGAAGACAAGCCACATAGTTCAATTTCACGAGGCCTTCCGTGACCAAACGAATCATTACCTGGTTTTTGAACTATTGGAGAAGAACCTGTATCAGCTTCAGAAAGAGAATGGTTTCAAGCCGATGGCGGTCCGCAACATCAGGACCATCACGTGTCAGATGATAAAAGCACTAGCCAAACTGAAGGAACTCGCCATCATTCATGCTGATCTGAAACCGGAAAATATAATGATCGTGGATCATTGTCGCCATCCTTTCAGCGTAAAGTTGATTGATTTTGGTTCTGCAAGTATTTTCAGTGAAGTGCATTTTGTTAAGGAGCCATACATCCAATCCAGGTTCTATAGGTCTCCTGAAATCCTCCTGGGCCTTCCATTCTGTGAGAAAGTGGACATGTGGTCTCTGGGTTGTGTGATGTCAGAGTTGTTCCTTGGATGGCCTCTGTATCCCGGCGATTCAGAATTCGATCAAGTGAGGTACATCTGCGAGACGCAAGGATTACCGCAAGCCCATCTGCTCAACATGGCCAGCAAGGTTCACAATTTCTTCAAGCTCACCACCAACAGTCGAGGTGAGAATAAATGGCAGCTCAAGCCCAACAAGAGGCGTCTCCCCTCAGGCACAGAAGGCCGTAGCCTCGGGAAGCAGCAGGGGTCAACGGATCGGAGGAAGTACATCCTCTCCTCCCTGGACCAGCTGGAGACCATGGAGTTCACGGAGCACGACACAGAGCTCCGCAACGAAGATGTGGCAGCAGAAATTGAGGACCGCCGGAGCATGGTGCAGCTCCTCAAGCGGATGTTAACCTTGGACTCCCACCAGAGGATCCTACCCAATGCAGCCTTACACCATCCTTTCATCAACATGCACCACTTACGCATGTACCCAGACTACAACCGCTACTATGAGCAGTCCGCTCAGGCTCTCCGTGAAGCCCTGATTCAGGATACAGCTCCAGAGGGAGACAGCTGTCGGTCTCACCATCTGAATGCAGAGAGGGGCCAGCGGTTCCTGTACCCCAGGGAGGAGGCCCACCAGTCATGTCCACGGGTTCAAAATCACCATGACCACCGGGAGGGCTATCCACCATCCTCAGAGGGTTTACAAGGTAACAATGGGGTTCTCTCCCAGCAGACCCCAGTCCCCAGTGTGCCTCAGTCCCCCACAGCACTGATTGAAGACCTGATGGAGAGTTTGTGCATTGTGGATGAGGCCAGCCTGGAGACCACCATGGGGGTATGGGCGGACAAGGATGCCCAGTGTGCCTTCCATCCGTCCAGTTCTGTGATACCTTCAGATCTCCAAGCTGGCCTCCAACCAAGTGAAAGCATTGCCTTCCAGGAGACTGAGCTAGACTGTCCTCACTTAGGCTCCACCagcagagaggaaccagagagtgGCTCCATGCTGTCCTATTTCACTAGGCTGTGTGAGAGCCAGCGCCTGAGGCAGCCAGTGGCCAGGTCCTCGCGGTCCGATCCTACCCACAGGTTGAGCTACACCTCTGTGCCCCAGGTGGACAAAGCAGGTGAGCCCATAGGCTTCAGTTTCTTTTCTAGGGACCCCACCACCCAACAGGACCTTGCAGGGCCCAGGGAGCAGGCAGGGGCAAAGGAGGCAGCCCGTGATTATGGTTTGGAGGATATCCAGTTTCTCAATTTTGAACCTGAAGGCTACACCTGTCATTGTGGCCAATGGTGGCCGGCGTGGACCACGGACCCAGAGGTGTCCTCCTACCTGGGCTACGGCCCCCCAGCCTGCTGTAGCCATACACAGCAGCAATGCCTCCACTACTGA

Function

symbol description
hipk4 Predicted to enable protein serine/threonine kinase activity and protein tyrosine kinase activity. Predicted to be involved in peptidyl-serine phosphorylation and peptidyl-threonine phosphorylation. Predicted to act upstream of or within histone phosphorylation; protein autophosphorylation; and regulation of signal transduction by p53 class mediator. Predicted to be active in cytoplasm and nucleus.

NR:

description
homeodomain-interacting protein kinase 4

GO: NA

KEGG:

id description
K08826 HIPK; homeodomain interacting protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021586943.2 True 1995 mRNA 0.52 3 9209754 9212063

Neighbor

gene id symbol gene type direction distance location
LOC110507469 sertad3 coding upstream 79019 9128031 ~ 9130735 (+)
LOC110507468 blvrb coding upstream 83442 9123596 ~ 9126312 (+)
esrrd LOC106580735 coding upstream 166075 9036968 ~ 9043679 (+)
LOC110507061 ltbp4 coding upstream 176646 8958406 ~ 9033108 (+)
LOC110507459 LOC106580729 coding upstream 417941 8788596 ~ 8791813 (+)
LOC110507479 LOC106580747 coding downstream 59778 9271841 ~ 9273709 (+)
LOC110507484 LOC106580753 coding downstream 294422 9506485 ~ 9538992 (+)
LOC110507488 LOC106580752 coding downstream 385093 9597156 ~ 9619474 (+)
LOC110507489 LOC106580757 coding downstream 412851 9624914 ~ 9640110 (+)
LOC110507491 LOC106580758 coding downstream 434624 9646687 ~ 9658211 (+)
G2049095 NA non-coding upstream 39105 9170449 ~ 9170649 (+)
G2049091 NA non-coding upstream 47767 9161648 ~ 9161987 (+)
G2049089 NA non-coding upstream 53389 9155421 ~ 9156365 (+)
G2049072 NA non-coding upstream 70543 9135555 ~ 9139211 (+)
G2048957 NA non-coding upstream 87574 9121768 ~ 9122180 (+)
G2049073 pld3 non-coding downstream 287 9212350 ~ 9224788 (+)
G2049107 NA non-coding downstream 41428 9253491 ~ 9254055 (+)
G2049132 NA non-coding downstream 45970 9258033 ~ 9258407 (+)
G2049133 NA non-coding downstream 62279 9274342 ~ 9274622 (+)
G2049134 NA non-coding downstream 62625 9274688 ~ 9275166 (+)
si:cabz01090165.1 LOC106580728 other upstream 485451 8606550 ~ 8741534 (+)
G2046384 LOC106612398 other upstream 1951524 7256631 ~ 7258230 (+)
G2046345 NA other upstream 1958179 7245806 ~ 7251575 (+)
G2045665 NA other upstream 2489062 6719764 ~ 6720692 (+)
G2045655 NA other upstream 2516710 6692544 ~ 6693044 (+)
G2049339 LOC100380674 other downstream 195562 9407625 ~ 9408571 (+)
G2049657 NA other downstream 575743 9787806 ~ 9788115 (+)
LOC110507067 LOC106580782 other downstream 1067047 10251889 ~ 10282483 (+)
LOC110507523 LOC106580787 other downstream 1176938 10384807 ~ 10390951 (+)
LOC110507524 LOC106612657 other downstream 1194310 10391240 ~ 10417311 (+)

Expression


Co-expression Network