Item | Value |
---|---|
gene id | LOC110507552 |
gene name | LOC106580815 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048591.1 |
NCBI id | CM023245.2 |
chromosome length | 51556237 |
location | 12304291 ~ 12326265 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
id | description |
---|---|
K16462 | CEP164; centrosomal protein CEP164 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036965576.1 | False | 4791 | mRNA | 0.56 | 28 | 12304291 | 12326264 |
XM_036965577.1 | False | 4788 | mRNA | 0.56 | 28 | 12304291 | 12326264 |
XM_036965579.1 | False | 4828 | mRNA | 0.56 | 28 | 12304291 | 12326264 |
XM_036965580.1 | False | 4734 | mRNA | 0.56 | 27 | 12304291 | 12326264 |
XM_036965578.1 | False | 4786 | mRNA | 0.56 | 28 | 12304291 | 12326265 |
XM_036965582.1 | True | 3683 | mRNA | 0.59 | 25 | 12305844 | 12326265 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110507071 | LOC106612637 | coding | downstream | 33995 | 12214081 ~ 12270296 (-) |
LOC110507550 | tmem25 | coding | downstream | 90804 | 12207006 ~ 12213487 (-) |
LOC110507549 | NA | coding | downstream | 98518 | 12193906 ~ 12205773 (-) |
LOC110507548 | LOC106580813 | coding | downstream | 117591 | 12161922 ~ 12186700 (-) |
LOC110507547 | mpzl3 | coding | downstream | 151349 | 12139581 ~ 12152942 (-) |
LOC110507556 | LOC106580821 | coding | upstream | 70777 | 12397042 ~ 12409818 (-) |
ftr86 | LOC106580822 | coding | upstream | 97138 | 12423403 ~ 12427303 (-) |
LOC110507558 | LOC106580824 | coding | upstream | 113255 | 12439520 ~ 12448356 (-) |
LOC110507073 | NA | coding | upstream | 134733 | 12460998 ~ 12465326 (-) |
LOC110507262 | LOC106592295 | coding | upstream | 150769 | 12476649 ~ 12478283 (-) |
G2052936 | NA | non-coding | downstream | 103526 | 12200399 ~ 12200765 (-) |
G2052935 | NA | non-coding | downstream | 104505 | 12199569 ~ 12199786 (-) |
G2052730 | NA | non-coding | downstream | 362202 | 11895621 ~ 11942089 (-) |
G2053015 | LOC106580819 | non-coding | upstream | 41682 | 12367947 ~ 12370577 (-) |
G2053045 | LOC106580820 | non-coding | upstream | 50501 | 12376766 ~ 12381867 (-) |
G2053026 | NA | non-coding | upstream | 77873 | 12404138 ~ 12405134 (-) |
G2053080 | NA | non-coding | upstream | 149225 | 12475490 ~ 12475719 (-) |
G2053081 | NA | non-coding | upstream | 149995 | 12476260 ~ 12476590 (-) |
LOC110507536 | NA | other | downstream | 1754648 | 10546269 ~ 10551243 (-) |
il15l | LOC106580769 | other | downstream | 2401079 | 9867518 ~ 9903614 (-) |
LOC110507487 | LOC106580756 | other | downstream | 2742232 | 9555839 ~ 9593646 (-) |
G2049778 | LOC106580756 | other | downstream | 2746459 | 9548527 ~ 9557832 (-) |
LOC110507074 | dpf1 | other | upstream | 226240 | 12483779 ~ 12575898 (-) |
LOC110507567 | LOC106612619 | other | upstream | 392505 | 12716232 ~ 12720583 (-) |
G2053344 | LOC101073377 | other | upstream | 468702 | 12794967 ~ 12801947 (-) |
G2054116 | NA | other | upstream | 671351 | 12997616 ~ 12998116 (-) |
G2054307 | LOC106612521 | other | upstream | 1075499 | 13401764 ~ 13403999 (-) |