sirt2 (sirt2)


Basic Information

Item Value
gene id sirt2
gene name sirt2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 12875801 ~ 12880508 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587653.2
GTTTATTGTTGGAATATTTCTTATGCGGAAGTTAGCAACACGGAATTAATTCGCGACGGACAACAACAATCATATCGCAACTGTACGAATCAACCTGCATATTTAGCAAGTTAAGTTAAACATACGGGAgcaacacacacaatagcatacACATCTGTGTTGGATTAGTCTAGACGGATAAATGTCTGATGTACCAGCTTCTAACAGAGAAGAGGTCGAGGAGAACACCCCTGAACCAGAGGAGCAGTCAGACGATAGCAGTGACGACGGCGAGGCATCAGGGGACACAGAGATGGATTTCCTGCGCAATCTCTTCTCTAAAACCTTGGGCATATCTGGAGAGAAGGTTTTGGATGAGCTGACTCTTGAGGGGGTGGCCAGTTACATACAGAGTGGCAAATGCAAAAACATAATCTGTATGGTGGGTGCAGGGATCTCTACATCGGCTGGGATCCCTGACTTCCGCTCCCCAGACACAGGGCTCTATGCTAACCTGCAGAAGTACAACTTGCCATACCCTGAGGCTATCTTCCAGATAGACTACTTTAAGAAACACCCTGAGCCCTTCTTTGCCCTGGCCAGGGAGCTGTACCCAGGACAATTCAAGCCCACAGTATGTCACTACTTCATCAAGTTGCTGAAGGACAAAGGGCTACTCAAACGCTGCTACTCACAGAATATTGACACCCTGGAACGTGTAGcaggactggagggagaggacCTGATTGAAGCCCACGGCACCTTCTACACCTCACACTGTGTCAGCTTTATGTGCCGCAAAGAGTACGACTTGGACTGGATGAAAGAGAAAATCTTCTCGGATGACATCCCCAAATGTGACAAGTGCAGCAATCTGGTTAAACCAGACATTGTTTTCTTTGGTGAGAATCTACCGAAGAGGTTCTTCACCTCAATGGCCATGGACTTTCCTCGCTGTGATCTGCTGATTATAATGGGGACCTCCCTGCAGGTTCAGCCCTTTGCTGCTCTGGTTGGCAGGGTTTCAAACAGCTGCCCTAGACTGCTCATTAACCTGGAGAAAGCAGGCGGTGCAGATCCTCTATTAGGGATTATAAGCATTGGCGGAGGGATGGACTTTGACTCAGCGAAAGCATACAGGGATGTGGCTCATATTAGTACATGTGATGATGGATGCTTGGCACTTGCTGAGCTACTGGGATGGAaggCGGAGCTGGAAGAGATGGTGAAACGGGAGCATGAGAAGATTAACAGCAAAGCCGAAGAGGAACGGACAAATCAGAGCTCTGGAGCTGCAGGGAAGGCGGAGTCAGGGAAGGCGGAGTCAGGGAAGGCGGAGTCAGGGAAGGCGGAGTCAGGGGAGGCGGAGGTAGAATAACTAATGAGACTGGCCGGCCGGCTCCAACCCATCACTTGGCTTCAGTCTGGAAGCAGAGTTCCATACATTAACCAGGACTGTGCTCTCCTGTCTGTTTTGGATTTTCTCCCTTTAGTTTGCACTTTACtaacttctctctcctctccaacctCTGTTTGACATAAACCCACCTCCTGACTCCTACTGTGTGTATTGGTCTGTCTTTTGACAGTTCCCACAGATGGAGTTTATAGCAATACACACTAAAATGAGCATACGTTTCCTTCTGAGGGAGAGAACTACAGGCACTGagctgtcagcatgccaactaGCTCTGTTGAGTCATATAGTTGATGATTTTAGACTGAAATGACAAAGTGTAGAGGGCATGGCAGGGTAACAAAGATGATGAATATCTGATGCATCCACTGATGCAGTGACACAACTACTGTAAATAAAATGGGGGAAAAGTATAATATAGCATTTTATGACTTACTATTTATAAGCAATTATAATTATGGATTTGTTTTTCATGACATTGCTTTTTGTGCTCCTTGTTTCTATCAATTGTTTCAATATAATTATTTTTAACAATATGTTTTAATCTATTAAGCGTACCTGTGACATTTAGTTTCTCTACTTCCTGTAGCTGTTGGTGTAGGACGGTTTCTATTTCAGCACAAATGATGCAGCAGGAAGTTACCACAGTGGTGTGAGATGATGTCGCAGTACATCTCTGGTGTTGACCAAATGCAACTCGATGCTTTCTAAAAGATTGCGTGTGATACAACAAGTAAAAACACAAAATAAAGTGTCAGTCTCCCTCTGAA
>XM_021587652.2
TTTATTGTTGGAATATTTCTTATGCGGAAGTTAGCAACACGGAATTAATTCGCGACGGACAACAACAATCATATCGCAACTGTACGAATCAACCTGCATATTTAGCAAGTTAAGTTAAACATACGGGAgcaacacacacaatagcatacACATCTGTGTTGGATTAGTCTAGACGGATAAATGTCTGATGTACCAGAAGCTTCTAACAGAGAAGAGGTCGAGGAGAACACCCCTGAACCAGAGGAGCAGTCAGACGATAGCAGTGACGACGGCGAGGCATCAGGGGACACAGAGATGGATTTCCTGCGCAATCTCTTCTCTAAAACCTTGGGCATATCTGGAGAGAAGGTTTTGGATGAGCTGACTCTTGAGGGGGTGGCCAGTTACATACAGAGTGGCAAATGCAAAAACATAATCTGTATGGTGGGTGCAGGGATCTCTACATCGGCTGGGATCCCTGACTTCCGCTCCCCAGACACAGGGCTCTATGCTAACCTGCAGAAGTACAACTTGCCATACCCTGAGGCTATCTTCCAGATAGACTACTTTAAGAAACACCCTGAGCCCTTCTTTGCCCTGGCCAGGGAGCTGTACCCAGGACAATTCAAGCCCACAGTATGTCACTACTTCATCAAGTTGCTGAAGGACAAAGGGCTACTCAAACGCTGCTACTCACAGAATATTGACACCCTGGAACGTGTAGcaggactggagggagaggacCTGATTGAAGCCCACGGCACCTTCTACACCTCACACTGTGTCAGCTTTATGTGCCGCAAAGAGTACGACTTGGACTGGATGAAAGAGAAAATCTTCTCGGATGACATCCCCAAATGTGACAAGTGCAGCAATCTGGTTAAACCAGACATTGTTTTCTTTGGTGAGAATCTACCGAAGAGGTTCTTCACCTCAATGGCCATGGACTTTCCTCGCTGTGATCTGCTGATTATAATGGGGACCTCCCTGCAGGTTCAGCCCTTTGCTGCTCTGGTTGGCAGGGTTTCAAACAGCTGCCCTAGACTGCTCATTAACCTGGAGAAAGCAGGCGGTGCAGATCCTCTATTAGGGATTATAAGCATTGGCGGAGGGATGGACTTTGACTCAGCGAAAGCATACAGGGATGTGGCTCATATTAGTACATGTGATGATGGATGCTTGGCACTTGCTGAGCTACTGGGATGGAaggCGGAGCTGGAAGAGATGGTGAAACGGGAGCATGAGAAGATTAACAGCAAAGCCGAAGAGGAACGGACAAATCAGAGCTCTGGAGCTGCAGGGAAGGCGGAGTCAGGGAAGGCGGAGTCAGGGAAGGCGGAGTCAGGGAAGGCGGAGTCAGGGGAGGCGGAGGTAGAATAACTAATGAGACTGGCCGGCCGGCTCCAACCCATCACTTGGCTTCAGTCTGGAAGCAGAGTTCCATACATTAACCAGGACTGTGCTCTCCTGTCTGTTTTGGATTTTCTCCCTTTAGTTTGCACTTTACtaacttctctctcctctccaacctCTGTTTGACATAAACCCACCTCCTGACTCCTACTGTGTGTATTGGTCTGTCTTTTGACAGTTCCCACAGATGGAGTTTATAGCAATACACACTAAAATGAGCATACGTTTCCTTCTGAGGGAGAGAACTACAGGCACTGagctgtcagcatgccaactaGCTCTGTTGAGTCATATAGTTGATGATTTTAGACTGAAATGACAAAGTGTAGAGGGCATGGCAGGGTAACAAAGATGATGAATATCTGATGCATCCACTGATGCAGTGACACAACTACTGTAAATAAAATGGGGGAAAAGTATAATATAGCATTTTATGACTTACTATTTATAAGCAATTATAATTATGGATTTGTTTTTCATGACATTGCTTTTTGTGCTCCTTGTTTCTATCAATTGTTTCAATATAATTATTTTTAACAATATGTTTTAATCTATTAAGCGTACCTGTGACATTTAGTTTCTCTACTTCCTGTAGCTGTTGGTGTAGGACGGTTTCTATTTCAGCACAAATGATGCAGCAGGAAGTTACCACAGTGGTGTGAGATGATGTCGCAGTACATCTCTGGTGTTGACCAAATGCAACTCGATGCTTTCTAAAAGATTGCGTGTGATACAACAAGTAAAAACACAAAATAAAGTGTCAGTCTCCCTCTGAA

Function

symbol description
sirt2 Predicted to enable NAD+ binding activity; NAD-dependent histone deacetylase activity (H4-K16 specific); and tubulin deacetylase activity. Acts upstream of or within cilium assembly; hemopoiesis; and negative regulation of angiogenesis. Predicted to be located in several cellular components, including Schmidt-Lanterman incisure; main axon; and microtubule cytoskeleton. Predicted to be active in nucleus. Is expressed in liver and retina. Orthologous to human SIRT2 (sirtuin 2).

NR:

description
NAD-dependent protein deacetylase sirtuin-2-like isoform X3

GO: NA

KEGG:

id description
K11412 SIRT2, SIR2L2; NAD+-dependent protein deacetylase sirtuin 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587653.2 False 2166 mRNA 0.46 16 12875801 12880508
XM_021587652.2 True 2168 mRNA 0.46 16 12875802 12880508

Neighbor

gene id symbol gene type direction distance location
LOC110507577 LOC106580842 coding upstream 20500 12817186 ~ 12855301 (+)
nop53 LOC106612613 coding upstream 61764 12802441 ~ 12814037 (+)
trnaa-ugc-186 NA coding upstream 80131 12795595 ~ 12795670 (+)
LOC118944739 NA coding upstream 84686 12782256 ~ 12791115 (+)
LOC110507572 LOC106580837 coding upstream 123373 12749517 ~ 12752428 (+)
rinl rinl coding downstream 127 12880635 ~ 12892609 (+)
LOC110507586 LOC106565025 coding downstream 107065 12987564 ~ 12988797 (+)
LOC118944675 NA coding downstream 184783 13065291 ~ 13075518 (+)
LOC110507591 map4k1 coding downstream 317347 13197855 ~ 13216273 (+)
LOC110507592 LOC106580858 coding downstream 335971 13216479 ~ 13222270 (+)
G2053205 NA non-coding upstream 80059 12782380 ~ 12795742 (+)
G2053249 NA non-coding upstream 104164 12771433 ~ 12771637 (+)
G2053243 NA non-coding upstream 121015 12754484 ~ 12754786 (+)
G2053240 NA non-coding upstream 127499 12748034 ~ 12748302 (+)
G2053239 NA non-coding upstream 127982 12747146 ~ 12747819 (+)
G2053387 NA non-coding downstream 68893 12949401 ~ 12952410 (+)
G2053388 LOC106580853 non-coding downstream 73346 12953854 ~ 12954147 (+)
G2053390 NA non-coding downstream 76230 12956738 ~ 12957782 (+)
G2053439 NA non-coding downstream 88574 12969082 ~ 12969315 (+)
G2053446 NA non-coding downstream 103397 12983905 ~ 12984262 (+)
nudt8 LOC106580825 other upstream 436323 12436060 ~ 12439501 (+)
G2051018 LOC106580809 other upstream 738002 12127441 ~ 12137799 (+)
G2051034 NA other upstream 1882213 10992985 ~ 10993588 (+)
LOC110507540 git1 other upstream 2097434 10755190 ~ 10778403 (+)
rap1gap2a LOC106580794 other upstream 2292716 10494894 ~ 10583085 (+)
G2053443 NA other downstream 98019 12978527 ~ 12978923 (+)
LOC110507618 LOC107659943 other downstream 674232 13554250 ~ 13575495 (+)
LOC110507180 LOC106612536 other downstream 1945012 14825520 ~ 14841123 (+)
G2056256 NA other downstream 2716525 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 3189062 15776205 ~ 16131560 (+)

Expression


Co-expression Network