Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944675 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 13065291 ~ 13075518 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039982.1 | True | 654 | mRNA | 0.50 | 4 | 13065291 | 13075518 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507586 | LOC106565025 | coding | upstream | 76753 | 12987564 ~ 12988797 (+) |
| rinl | rinl | coding | upstream | 172682 | 12880635 ~ 12892609 (+) |
| sirt2 | sirt2 | coding | upstream | 184783 | 12875801 ~ 12880508 (+) |
| LOC110507577 | LOC106580842 | coding | upstream | 209990 | 12817186 ~ 12855301 (+) |
| nop53 | LOC106612613 | coding | upstream | 251254 | 12802441 ~ 12814037 (+) |
| LOC110507591 | map4k1 | coding | downstream | 122337 | 13197855 ~ 13216273 (+) |
| LOC110507592 | LOC106580858 | coding | downstream | 140961 | 13216479 ~ 13222270 (+) |
| LOC110507593 | hif1a | coding | downstream | 158013 | 13233531 ~ 13264437 (+) |
| LOC118944728 | LOC106580863 | coding | downstream | 277211 | 13352729 ~ 13365310 (+) |
| LOC110507076 | LOC106580865 | coding | downstream | 310531 | 13386049 ~ 13404009 (+) |
| G2053478 | NA | non-coding | upstream | 28649 | 13036418 ~ 13036642 (+) |
| G2053477 | NA | non-coding | upstream | 31203 | 13033557 ~ 13034088 (+) |
| G2053460 | LOC106580848 | non-coding | upstream | 61362 | 13003462 ~ 13003929 (+) |
| G2053455 | LOC106612604 | non-coding | upstream | 72484 | 12992590 ~ 12992807 (+) |
| G2053453 | LOC106612604 | non-coding | upstream | 73595 | 12991284 ~ 12991696 (+) |
| G2053509 | NA | non-coding | downstream | 36723 | 13112241 ~ 13112899 (+) |
| G2053510 | NA | non-coding | downstream | 37407 | 13112925 ~ 13113560 (+) |
| G2053514 | NA | non-coding | downstream | 38288 | 13113806 ~ 13115066 (+) |
| G2053511 | NA | non-coding | downstream | 39685 | 13115203 ~ 13123073 (+) |
| G2053513 | actn4 | non-coding | downstream | 50777 | 13126295 ~ 13135347 (+) |
| G2053443 | NA | other | upstream | 86368 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 625813 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 927492 | 12127441 ~ 12137799 (+) |
| G2051034 | NA | other | upstream | 2071703 | 10992985 ~ 10993588 (+) |
| LOC110507540 | git1 | other | upstream | 2286924 | 10755190 ~ 10778403 (+) |
| LOC110507618 | LOC107659943 | other | downstream | 479222 | 13554250 ~ 13575495 (+) |
| LOC110507180 | LOC106612536 | other | downstream | 1750002 | 14825520 ~ 14841123 (+) |
| G2056256 | NA | other | downstream | 2521515 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 2994052 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 3298748 | 16374266 ~ 16376043 (+) |
