LOC110507623 (pid1)


Basic Information

Item Value
gene id LOC110507623
gene name pid1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 14060874 ~ 14113581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587723.2
GCAGACCAGTTTCGGGAACTGCTCGCAGGCGAAAGCTTCATCAAGCTCCATTGGAATTCACTGTCTGTTTTCTCCAGATTGCAGAAGAGGAGAAGCAAGCGCCGAGAACAAGCAGATGTGAGCTGGACTACATAGAGAATAACCAGCAGCAGTAGTTACGGAAACCTTTGATTCTACTAAAATGTGGCAGCCAGCGACAGAGCGATTGCAGCACTTCCAGACGATGCTGAAGACCAAGCTGAACGTGCTGACACTGAGGAAGGAGCCGTTGCCCACGGTGATATTCCACGAGCCGGAGGCCATCGAGTTGTGCTCTACCACCCCACTCATAAAGAAAAACACCCATAACGgctacaagGTGACGTACCTGGGCAAGGTGACCATCTCAGGGACCCAGTTCCTGTCGGGCTGCACAGAGTCGGCAGTGGTGGGCCTGTGGAACCGCCGTGCGCTAGCCCAGGAAGAGCACCTCCCTGCCAACTCCCTCCTGGAGATCCGCCCCTTCCAGGTGCGACTGCACCACCTGGACGGGCGCGGTGAGGCCTCGGTCACCATGGACACGTACCAGGTGGCGCGCATCGCCTACTGTACGGCGGACCACTGCACGAGCCCCAATGTGTTCGCCTGGATCTACCGGGAGATCAACGACGACCTGACCTTCCAGATGGACTGCCACGCCGTGGAGTGTGAGAGCAAGCTGGAGGCCAAGAAGCTGGCCCACTCCATGATGGAAGCCTTCCGCAAGACCTTCCACAGTATGCGCAGCGATGGACGCATCCACAAGAGCGGCTCCTCGGACGAGTTCGCCACTGACGACTCCGCTCCAGATGACTCCACCCCCGAGGAGGATGGCTGAGCACCAGGGTTGCCGCCCCCCTCCCCCGGTCGCAAGCCGTGAGGGGAGGTGCACAGGTGCAGCCGGAGCACTCtttctactctctgtctctcttactctACTCTGGTTTAAGGAAAAAACTCAAATTGACTGACGCACAGACCGCAAACGCCGACTAAAGAATGACGAGGACGTAGTTTTAAAAAGGGAAAAATAGGAGGACAAAGGAACCACAAGAGATGAAACATATGGGGAAGCCAAACTAAACTAGCACTGCCTCTTTGGATAAATAGATCCTCAAACATCTGGATAGCCATTGAAGCGCATGATCTGCCCATTAGAGATGAGTGAAAAATGGTTATAAGACATTCCCAATCGACGCtgctgtctgtccgtccgtctgtctgtctgcaatgTGCAGAGAGACTCTGCCTCTTTACCCCACCGCGCGCCCCTTACTCACCCCTTCCCGCCCAATCAAAAGCCCAGATCACTTTCTAAGAATCCCAGATCACTGCCTCATGTTCTGACTTTAAAACAACAGCACTATGGAGTTACGAGTTATGCCTGTAGCACTGTTAAATGTGGGATATAAAGAGAAAGCCTTGACTCTAATATATGTGTGGAAGGTTGCCGGGAGGTGGGAGGTCTTGACATATTTATTAAGCCACAAGAGCGTCATCTCTTATCGATCACATTTTGATTCCTTTTTTGGAAGCATACCAAAAGTGAGTCTTTTAGCTGTGTCTTGTCTCTTGATTTTGTGCCTCACTTCTAACATACCAAGGCTGGTCTCTGTCCCGCAATCCCaaacgtgtgcgtgtgtgtgtgtgtgtagtcgtgcatgtgtgtgtgtgtgtgatctaagAAAAAGGATTGTCAGGAGAGAGAGCATGACCGATAATGGGCTAGTAATCCAACTAGAAGTTTAAAACCTGTCACAGCCTTTGTGGCATCCATTTTGGGAAGCTCTGCAGGGCTTTTTAAATTTAAACAAGAATATGAccatttgacacatttttttgttttgttttgtatgaAAAGGGAAAGTAAATGTGACAGTCACAGAAACCGATGTTCTAGGACCCCAAAAATAGCCATCCATAAAGAATACCTGAAGCCTCTTGGCCTGTGCTGAATGTATTATAGGTATGTTGTGCTGCAAGCTCCTTACACATTTTAGTTACTTTGTTATTTTAGTACATTTCTTCTACATAGTTTTATCTGGATTAGGTGCAGTTGGCTAGGGCAGTTTTCTGTACAGACACCTTAAGGGAACAATTATGTCTCGTGGGCTGGGTGCGTGTTGAGTCcatgaacagacacacacagttcaGTTTCCCTGTGCTGTCGAAAGGTACGAGCGACCATTCTGGGGCAACTGGAAGCCTCCACGACACAAGAGCTCCACCCCTCCCACCCCCTTTTCTAACAAGACTCTTTTGAATGGACTGGTACTCACAGTGGGTGGGTCATGTATTTTTTCTGTTGTGACTGAAGCAGATTTTATTAAGATGGCTCTGGTCAGtacatacatatataaatatatacattgtaTTTGAAACTCATTCAATAAGCTTatgtaaatacaaaaaaaaaaaatatctgtttCCAAATATTACAGCATTAAATGTTGATAGCTATTTTAAATAAACAACGGGAACATCAAAGACAGCACCAATGTTTTAAAGTAAATTGTGAATATATATGAGTTCCATAGAACTGGCTGTTGAGAGGGTGTGTGAGCCCGGGACACAGGGCTTGAAATGCCAGGATGACAGGAGGAGGGAATGTTTATAAAGCTGTAGATTACTGTGTCATGTCTTGTCTGAAGGCTCAGACGTGCTTTAAATGTCTGGAAATGTTACCATAAGTGTTTTCTATACAGAATTTGCAAAGATAAAGAAGGCATCACATATAAACTATTTACCAAGACTGAC

Function

symbol description
pid1 Predicted to be involved in negative regulation of glucose import and regulation of reactive oxygen species metabolic process. Predicted to act upstream of or within negative regulation of insulin receptor signaling pathway; regulation of cell population proliferation; and regulation of mitochondrial membrane potential. Predicted to be active in cytoplasm. Is expressed in several structures, including hypochord; notochord; optic primordium; optic vesicle; and tail bud. Orthologous to human PID1 (phosphotyrosine interaction domain containing 1).

NR:

description
PTB-containing, cubilin and LRP1-interacting protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587723.2 True 2775 mRNA 0.47 3 14060874 14113581

Neighbor

gene id symbol gene type direction distance location
LOC110507622 LOC106580885 coding upstream 1612 13991372 ~ 14059262 (+)
LOC110507608 LOC106580884 coding upstream 75265 13941188 ~ 13985609 (+)
LOC110507620 NA coding upstream 124086 13917001 ~ 13936788 (+)
trnaa-ugc-188 NA coding upstream 133631 13927170 ~ 13927243 (+)
trnaa-ugc-187 NA coding upstream 169272 13891527 ~ 13891602 (+)
LOC110507624 LOC106580907 coding downstream 148474 14262055 ~ 14344492 (+)
LOC110507182 LOC106580908 coding downstream 252928 14366509 ~ 14370728 (+)
LOC110507081 LOC106612519 coding downstream 257582 14371163 ~ 14372310 (+)
LOC110507158 LOC106580945 coding downstream 330798 14444379 ~ 14526200 (+)
LOC110507181 LOC106580921 coding downstream 629482 14743063 ~ 14775758 (+)
G2053938 NA non-coding upstream 185832 13870721 ~ 13875042 (+)
G2053831 NA non-coding upstream 304303 13756183 ~ 13756571 (+)
G2053822 NA non-coding upstream 374651 13685007 ~ 13686223 (+)
G2053809 NA non-coding upstream 406895 13653772 ~ 13653979 (+)
G2054686 NA non-coding downstream 11256 14124837 ~ 14125039 (+)
G2054688 NA non-coding downstream 12135 14125716 ~ 14125945 (+)
G2054689 NA non-coding downstream 12545 14126126 ~ 14126480 (+)
G2054694 NA non-coding downstream 14951 14128532 ~ 14129252 (+)
G2054710 NA non-coding downstream 29403 14142984 ~ 14143232 (+)
LOC110507618 LOC107659943 other upstream 485379 13554250 ~ 13575495 (+)
G2053443 NA other upstream 1081951 12978527 ~ 12978923 (+)
nudt8 LOC106580825 other upstream 1621396 12436060 ~ 12439501 (+)
G2051018 LOC106580809 other upstream 1923075 12127441 ~ 12137799 (+)
G2051034 NA other upstream 3067286 10992985 ~ 10993588 (+)
LOC110507180 LOC106612536 other downstream 711939 14825520 ~ 14841123 (+)
G2056256 NA other downstream 1483452 15597033 ~ 15597651 (+)
LOC110507626 LOC106612913 other downstream 1955989 15776205 ~ 16131560 (+)
G2056820 NA other downstream 2260685 16374266 ~ 16376043 (+)
LOC110507087 LOC106612902 other downstream 2277440 16391021 ~ 16410705 (+)

Expression


Co-expression Network