Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110507084 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 15242563 ~ 15244502 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: sorting nexin-19-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036965778.1 | True | 666 | mRNA | 0.47 | 3 | 15242563 | 15244502 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il-18 | il-18 | coding | upstream | 54998 | 15183737 ~ 15187565 (+) |
| LOC110507185 | NA | coding | upstream | 73707 | 15166902 ~ 15168856 (+) |
| LOC110507163 | LOC106580923 | coding | upstream | 320069 | 14870110 ~ 14922494 (+) |
| LOC110507171 | usf1 | coding | upstream | 389239 | 14848805 ~ 14853324 (+) |
| LOC110507180 | LOC106612536 | coding | upstream | 401440 | 14825520 ~ 14841123 (+) |
| LOC110507162 | LOC106580931 | coding | downstream | 114646 | 15359148 ~ 15372166 (+) |
| LOC110507164 | LOC106580932 | coding | downstream | 135915 | 15380417 ~ 15405079 (+) |
| LOC110507174 | LOC106580954 | coding | downstream | 209764 | 15454266 ~ 15470216 (+) |
| LOC110507176 | LOC106580933 | coding | downstream | 238573 | 15483075 ~ 15487764 (+) |
| LOC110507160 | LOC106580937 | coding | downstream | 327880 | 15572382 ~ 15604161 (+) |
| G2055504 | NA | non-coding | upstream | 64881 | 15177442 ~ 15177682 (+) |
| G2055432 | sorl1 | non-coding | upstream | 145471 | 15095074 ~ 15097092 (+) |
| G2055361 | NA | non-coding | upstream | 151919 | 14938752 ~ 15090644 (+) |
| G2055369 | NA | non-coding | upstream | 195310 | 15044315 ~ 15047253 (+) |
| G2055276 | NA | non-coding | upstream | 384617 | 14857460 ~ 14857946 (+) |
| G2055632 | NA | non-coding | downstream | 130235 | 15374737 ~ 15375012 (+) |
| G2055656 | NA | non-coding | downstream | 183540 | 15428042 ~ 15428314 (+) |
| G2056167 | NA | non-coding | downstream | 196847 | 15441349 ~ 15441568 (+) |
| LOC110507618 | LOC107659943 | other | upstream | 1667068 | 13554250 ~ 13575495 (+) |
| G2053443 | NA | other | upstream | 2263640 | 12978527 ~ 12978923 (+) |
| nudt8 | LOC106580825 | other | upstream | 2803085 | 12436060 ~ 12439501 (+) |
| G2051018 | LOC106580809 | other | upstream | 3104764 | 12127441 ~ 12137799 (+) |
| G2056256 | NA | other | downstream | 352531 | 15597033 ~ 15597651 (+) |
| LOC110507626 | LOC106612913 | other | downstream | 825068 | 15776205 ~ 16131560 (+) |
| G2056820 | NA | other | downstream | 1129764 | 16374266 ~ 16376043 (+) |
| LOC110507087 | LOC106612902 | other | downstream | 1146519 | 16391021 ~ 16410705 (+) |
| G2057561 | NA | other | downstream | 1968608 | 17213110 ~ 17219017 (+) |
