LOC110507633 (LOC106580971)


Basic Information

Item Value
gene id LOC110507633
gene name LOC106580971
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 16304086 ~ 16305367 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587745.2
AAGCCATTCTGATTTGCACCCTGCTTTAATAAGAGGGGATTCATCACAGCCTGAGCTCAGAAAAAGACAGAGCTTACAGAGCAGAGCACAAAGTAACTGTGGGCAGGGCATTGCTGCACAGAGCTGAggcagcaacaacaacacaagCCAGCCTTCTTCTCCAGACAACAGGACCTGTGTTTGGGTTGAGCATGGGACTGCATGGGTCTAAACACCCTCATCAGGCTCAGATTGTGATGCTGGGCCTGGACGGCTCGGGGAAGTCCACCCTGCTCTACAAGCTCAAGTACAACGAGTCTGTCATCACCGTGCCCACCGTGGGCTTCAACGTGGAGATGCTGGAGACGGAGGCGAGGGGTCCGGGGTTGACCGTGTGGGACGTGGGAGGCCAGCAGAGGATGAGGCCCCACTGGAAGCACCACTACCCGGGCACGGAGGCCCTGGTGTTTGTGGTGGACAGCTGGGACCGCAGGCGTTTGGATGAGGCAAAGAAAGAGCTTCATCAGGTGCTGAGGAGCGGGAGTCTAAAAAGCCTTCCTCTGGTGGTGCTGGCCAATAAGCAGGACCTCCCCGGGGCAGCAAGCCCACAGGAGATCACCCACAGGTTGGACCTGAGAAGGGTATGTGGAAATAGGGATTGGTTTGTCCAGCCGTGCTCTGGGAGGACTGGTGTGGACCTGGAGGAAGGCTTCAGAAGGGTTGCCTATATGTTGAAGACTTCACTAAAGCAGACTAAGGCGGATATAAAGAACACAGTAAAACAACTGAAACCCAAAGCCATTACGATGATGACCAAGACACAAGGCCTGGGCTGCAGCTAAGACCAGTGATTATAAAACCCTATCGATGGGTGTAATAATCTCCCTTGGATTATTTTGTATTCTTCTTCTGGATTATTTTGAGCAGAGTACCTGATTTAGAATGCCCTGTGTTGGATCATTCTGACCTAATCATTCTTGAATATGGGAACAAGACTCTCCAGAACAAACTTGAGATCCCAACGTATCTAACGCTGAAAGCTATCATTTTGCACGTTTGTTGTATCAAAAACACTTTTGAACAATGTGAATTTCTGCATTTCCTTGTGAATTTTTTTATTATAAATTAAAAACCACTCA

Function

NR:

description
ADP-ribosylation factor-like protein 14

GO: NA

KEGG:

id description
K17200 ARL14, ARF7; ADP-ribosylation factor-like protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587745.2 True 1118 mRNA 0.50 2 16304086 16305367

Neighbor

gene id symbol gene type direction distance location
LOC110507632 LOC106580964 coding downstream 1025 16289432 ~ 16303061 (-)
trim59 LOC106580965 coding downstream 15051 16283699 ~ 16289035 (-)
ift80 ift80 coding downstream 44041 16193245 ~ 16260045 (-)
si:dkeyp-97b10.3 LOC106580916 coding downstream 139939 16141725 ~ 16164147 (-)
LOC110507085 LOC106580950 coding downstream 534704 15768375 ~ 15769382 (-)
LOC110507635 LOC106580962 coding upstream 8924 16314291 ~ 16354923 (-)
LOC110507636 LOC106580961 coding upstream 85655 16391022 ~ 16394010 (-)
LOC110507637 LOC106580958 coding upstream 91646 16397013 ~ 16402360 (-)
LOC110507638 LOC106580969 coding upstream 123715 16429082 ~ 16430148 (-)
LOC110507088 LOC106580969 coding upstream 149608 16454975 ~ 16455919 (-)
G2057044 NA non-coding downstream 10953 16244089 ~ 16293133 (-)
G2057088 NA non-coding downstream 38396 16265269 ~ 16265690 (-)
G2056989 NA non-coding downstream 167691 16086312 ~ 16136395 (-)
G2056930 NA non-coding downstream 330469 15972993 ~ 15973617 (-)
G2057098 NA non-coding upstream 3255 16308622 ~ 16309147 (-)
G2057082 NA non-coding upstream 4940 16310307 ~ 16311683 (-)
G2057131 NA non-coding upstream 64057 16369424 ~ 16370245 (-)
G2057132 NA non-coding upstream 65656 16371023 ~ 16371237 (-)
G2057133 NA non-coding upstream 66328 16371695 ~ 16372157 (-)
G2056115 NA other downstream 927571 15376215 ~ 15376515 (-)
LOC110507082 LOC106580920 other downstream 1768846 14532256 ~ 14719525 (-)
LOC110507619 LOC106580882 other downstream 2546389 13755242 ~ 13757825 (-)
LOC110507606 LOC106580867 other downstream 2776651 13472445 ~ 13527504 (-)
G2054301 NA other downstream 2831673 13456485 ~ 13472413 (-)
LOC110507646 LOC106612894 other upstream 690193 16756597 ~ 17064214 (-)
LOC110507661 LOC106581010 other upstream 1159154 17464437 ~ 17481646 (-)
G2058724 NA other upstream 1616975 17922342 ~ 17922752 (-)
LOC110507754 LOC106581192 other upstream 4608747 20913520 ~ 20924130 (-)
LOC110507765 dynll2a other upstream 4964800 21270167 ~ 21273576 (-)

Expression


Co-expression Network