trnaa-ugc-189


Basic Information

Item Value
gene id trnaa-ugc-189
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 16324318 ~ 16324393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-189
ggtcccgtgtggctcagttggtagagcatggcgcttgcaatgccaaggttgtgggtttgattcccacaggggacca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-189 True 76 mRNA 0.58 1 16324318 16324393

Neighbor

gene id symbol gene type direction distance location
smc4 LOC106580963 coding upstream 42926 16260169 ~ 16281392 (+)
LOC110507263 LOC106580951 coding upstream 188575 16133567 ~ 16135743 (+)
LOC110507626 LOC106612913 coding upstream 192758 15776205 ~ 16131560 (+)
LOC110507625 LOC106580941 coding upstream 556196 15745005 ~ 15768122 (+)
LOC110507160 LOC106580937 coding upstream 720157 15572382 ~ 15604161 (+)
LOC110507634 nmd3 coding downstream 30610 16355003 ~ 16368356 (+)
LOC110507086 LOC106580960 coding downstream 56902 16381295 ~ 16390983 (+)
LOC110507087 LOC106612902 coding downstream 84010 16391021 ~ 16410705 (+)
LOC110507095 LOC106580905 coding downstream 192008 16516401 ~ 16518130 (+)
LOC110507096 LOC106580969 coding downstream 217468 16541861 ~ 16555306 (+)
G2056801 NA non-coding upstream 2454 16321206 ~ 16321864 (+)
G2056789 NA non-coding upstream 20281 16303455 ~ 16304037 (+)
G2056770 NA non-coding upstream 32723 16289436 ~ 16291595 (+)
G2056712 NA non-coding upstream 41153 16255136 ~ 16283165 (+)
G2056777 LOC106580968 non-coding upstream 65981 16257305 ~ 16258337 (+)
G2057174 NA non-coding downstream 118184 16442577 ~ 16468248 (+)
G2057302 LOC106612898 non-coding downstream 346685 16671078 ~ 16677588 (+)
G2057304 NA non-coding downstream 365191 16689584 ~ 16690727 (+)
G2056256 NA other upstream 726667 15597033 ~ 15597651 (+)
LOC110507180 LOC106612536 other upstream 1490730 14825520 ~ 14841123 (+)
LOC110507618 LOC107659943 other upstream 2748823 13554250 ~ 13575495 (+)
G2053443 NA other upstream 3345395 12978527 ~ 12978923 (+)
G2056820 NA other downstream 49873 16374266 ~ 16376043 (+)
G2057561 NA other downstream 888717 17213110 ~ 17219017 (+)
G2057788 NA other downstream 1231111 17555504 ~ 17566384 (+)
G2057804 NA other downstream 1259577 17583970 ~ 17585924 (+)

Expression


Co-expression Network