LOC110507114 (LOC106581006)


Basic Information

Item Value
gene id LOC110507114
gene name LOC106581006
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 17670454 ~ 17780391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964988.1
gagcagcggagagagagaatggtacaCCTCAGCGCGGATGCGAGTGAGATATTTATCAACACTCATTTTATACTCTCGTAACTTTAGCTGAACTGCTCGTATTTCTTTCTGGATTTTATGTGCAAAATTCTACGCATCTTTGCATTGGCTTCTCTCTCCAAATGGCTTGGATTATTCCTCCGCTGTTGCAACGCCAAGGGACTGGTACTGGCGCTGTTGTTTTGCTCTCTGCTTTGATCGCGGTGATTGTGACAGAGGACTCCGCTGCTCAGGTTTTCGACAGTTATGGATTATCATACGCGTTGAGATCGGAACTGTCAGAGGATGCTATATTGGTGGCCAACAATGGAATACGCGTGCCTTTCGGGAGAGCAGTGTTCATTGATCCTATCAATGATCTGGTAATTCAAGTACAACCGGGAGACAGATGTAGTATAACGGTTCTGGATAACGACCCGCTCTCCCAGAGGCCAGGGCAGCTCTCTCCCAAAAAGTTTCCCTGTGAATTTGGTCCCAATGACGTAAAGTATTCTCACTTCGGGTCCAGGAGCCCCCCGCTGGATAGGGTGAGGCTACAGCTCAGATATGACACTCAAACCGACACCATAATCATCCCGTTTATGATGGAAGTGGAAGTGATTTTTACACAGTTGGAAGTGTTAACCAGAAATATGCCTCTGACTGTTGACAAACTGCTTGGTACTAGTAACCCCATTGACAGTAAGATTCTGGAGTTCACCTATGATAGAAGTGAACATCAGTGTAAAATAACGTCTCTCTCCAGTGACAGTGCATTACCCAGGTATGGAAAACTTGTGGATGAGGGAAAACTTGGAAAAATGGTTGACTGTGACAAATTTATTAAAATGAATACCCGCTATCAGCACACTTTTGCACACAAATCACCCAATAGAGATTATTTCCCAATGATTGTGGAATTACAAGATAAAGAGGGTAATCTGCTGAAGCAGGAGTTTTTCCAGGTGATGGTGCGTAtaaaggatggagaggagaacacGGCTCCTAAACCCAGCTTCGTGGCCATGATGATGATGGAGGTGGATCAGTTTGTGATGACAGCCATCACCCCTGACATGCTGGCTGCTGAGGACATTGAGTCTAACCCTGACAACCTTATCTTCAACatcacctcccccctctccttcgaGGAGGGGTACATAGTCAGTACAGATGACCGGAACCTGCCCATCACCTCTTTCTACCAGGGAGACCTCAAAGAACTAAAGATAGCCTACAAGCCTCCGTCTGTGGACTCTGAGACAGAACGTATCTTCCAGATAGAGTTTGAGGTGGTGGACACTGAGGGGGCTGTGTCTGATCCATTCGCCTTCATGATTGTAGTGAAACCTATGAACACGCTTGCTCCAGTAGTCACCAGGAATACGGGTCAGCTTCTCTACGAGGGTCAGTCCAGACCACTGTCCAGCTCTCACAACCTAGAGGTCAGTGACGAGGACAACCTGGATGATGTCAAGATCACAGTGGTCGACGGGCTGCGGCATGGCCAGCTGACAGTGCTCGGGTCACGCAGGAAGTTCTTCGCCCCAGCTGATCTGGACGGGGGCGTGGTCATCTACCAGCACGACGGCAGCGACACGTACAGCGACAACATTATCTTCCGGATGACGGATGGGAAGCACGAGGTGGAGTTCCTGTTTCCCCTGACAATCGTTCCCACGGATGATGAGCCGCCCATTATCAATGCCAACACGGGGTTAATCCTCTTCAAGAACCAGATGATGCTCATTTCGCCACTCACACTCAGCGCTGCAGACATCGACTCTGAGGACTCCACTATCAGGTTCACCATAGAGGCACCGTTCTCGCCTATAGGGGAGGTGCTGCTGAGGCAGTCAGAGGCCCCAGAGGACCCCTCCACCTGGAAATTCAACGCTGAGGATGAGCTGTATGAGAAAGAGGTTACAGAGTGGCTGCAGCAGGATATCACAGATGGAAAACTGTTCTACAGACACACAGGGCCTCACAGCACTGACACAGTCATGGACCAGTTTGTATTCCGGGTCCAGGATGATAATGACCCCCCTAACCAATCAGAACAGAGCTCGTTCATCATCAAGATTCTGCCTGTGGATGACATCCCCCCTGAGCTGTATCCTGGTACCACCCTCCAGATGACCGTACACGAGTACCAGCTCACCTACTTCCGGAAGAAGTTTCTCCGCTACACTGACCTGGACTCGGAGGACAGAGATCTGAAGTACACCGTCACCCAGCCCCCGACAGACACAGACGAGAACAGCCCTGTGGTACTGGGCTCTATTGTGTTAACAGAGAGTCCAGACACTGTAGTGACTGAGTTTACTCAGGCTCAGGTCAACCACCATAAGATATCATACAACCCACCTGACCTGGAGCTGGGGATCACAGCCCACGTTCTGCAGGTCCAGTACACGGTGGAGGATACGTCAGGGAATACTGTCATCGGAACGTTCTCTATATTTCTGCAGCCTGTCGACAACAAGCCGCCTCAGATAACCAACACTGGCTTCACTATATTCGAGCGGGGAACACACAAAATCACCAGAGCTGAGCTGCATACTGTGGACTTAGACACGGACAGTAGCCAGATCTCCTTCACTCTAACTCAGCCCCCTCAGCACGGCACGGTCCAGTACACCTTCACCGACCTGACCAAAGGAGACGCGTTCAACCTGTTGGACATCGCTAACGACAGGATCTCCTACATCCACAATGGAGACGAGTCCACCAGCGATTTCTTCCAGCTGGATGTCAGTGACGGCGTCCATGTTGTGACCATCACCATAAGGGTTATCGTGAAGCCCATTGATGATGAGACCCCGACCATCAGCCTGCCGGCCGGAACCATCGGCTCCTACATTGACGTCCTGGAGAACGGAGCCACTGAGATCACGACTAAAGTCATCCAGGGGCGGGACGAGGACACAGACGACCTCCGTTTGACCTTCATCCTGGAGGACCCACCGGTTTTCGGGGAGATTCTGGTGAACGGGGTCCAATCAGGAAGCTTTACCCAGGCTGATGTCATCAACGGACTGGTGGTGTACGCCCACACCAGCGGAGAGATCGGACTCACCACTAAATACGACTACTTTAATCTGACGCTGACAGACATGTCTGATGAGTGGACGGTAGGGGGCAACAGGGTCACGGGGGTCAGGGTTCAGATCACCATCCTCCCCATGGACAGCCAGGCTCCAGAGGTGTTTATAGGCCCACAGTTCACTGtcgtagagggagagaagaatgtGATAGAGATTTTTCACATTAGCGCTGATGATATTGACACTCCTAATGATGACCTGCTTTGTACCATCATTGTCCAGCCCACGTCAGGCTACGTGGAGAACATCTCCCCGGCCCCAGGTTCAGAGAAGTCCAGGTCTGGGACTGCAATCAGTGCATTCACCACCAAGGACATCAGACAAAACCACATCTACTACGTCCAAAGCATCCATAAAAGAGTGGAGCCGGTAGAGGACAGGTTCACGTTCAGATGCTCTGACGGCATTAACTTCTCCGAGAGACATTTCTTCCCCATCGCTATCATCCCGTCCAACGATGAGAAGCCAGAGATCTATATGAGGGAGTTTGTCGTCATGGAAGGGATGAATATTGTCATCGATACGCCCATCCTGAACGGAGCCGACGCGGACATCCCCTCGGACGAACTCACTTTCATCATCACCAAACCACCAAAGCACGGCTTCATCCTCAACCAGCTGACAACCGGCACCGTCACAGTCACCAACTTCACCCTGGACCAGATCAGGGAAGCCTCCAGTATAGTGTATGAACACGATGACTCTGAGACCAAGGAGGACAGCTTTGACTTAATCCTGACGGACGGTAAATATACCGTGGAGAAGAACATCATTGTTATGATCATCCCTGTAGATGACGAGACACCCAGGATGGCCATCAACGACGGTTTGGAAATAGAGATAGGAGACGTTAAAGTGATCGATAACAATGTTTTAAAAGCCACCGACCTGGACTCAGAGGATAGTACTCTGACGTACGTTGTTCGCTACGGGCCGGGCCAGGGGTTGTTACAGAGGAGAACCCCTTACGGGACGTTAGAGAACATCACAGTGGGGATGAACTTCACCCAGTACCAGGTGGACCAGGCTCTCATCGTCTATATCCACAATGGGCAGGAAGGAATCCGGGACCTTATCAAGTTTGACGTGACGGACGGGATCAACCCTCTGATCGACAGGTACTTCTACGTGACAGTGGGCGGCATCGACATGGTGTTCCCTGACGTGGTCAGTAAGGGGGTCTCTCTGAAAGAAGGCGGTAGAGTAACGTTGACCACAGACCTGCTCAGCACCAGCGACCTCAACAGTCCCGACGAACACCTGGTGTTCACCATCACCAGAGCCCCACAGAGAGGCCATCTGGAGTGTACCGACGGCCCTGGTATGCCCATCTCCTCCTTTACCCAACTCCAGCTAGCTGGGAGCAAGGTGTACTACATACACACGGCCGATGATGAGGTGAAGATGGACAGCTTTGAGTTTGAGGTCACCGACGGTTACAACCCTGTGTTCCGCACGTTCCGTGTCTCCATCACCGACGTGGACAACAAGAAACCGGTTCTAACGGTTCACAGCCTGGTGGTTAACGAGGGAGAGAACAAACTCATCACACCCTTCGAGCTGACCGCAGAGGACCGCGACACAGCTGACCCCCTCCTGAAGTTCACAGTCACCCAGGTCCCTGTCCACGGTCGCCTCCTCTTCAACAACACCCGCCCTGtctcctccttcaccaaacaGGACCTGAACGAGAACCTCATCAGCTACAAACACGACGGTACTGAGTCCTCCAAGGATTCCTTCTCCTTTATCGTGACTGACGGGACGCACACCGACTTCTATGTGTTCCCAGACACCGTGTTCGAGACGCGGCGCCCCCAGATGATGAAGATCACGGTCCTGTCGGTGGATAACGGGGTGCCCCAGATCGTGGTGAATAAAGGGGGGCCCACCCTGAGGGTGTTAGAGACGGGTCACCTGGGGTTCCTCATCACCTCTAAGACTCTTAAGGCCGAGGACAGGGATAGTCTTCAGCTATCTGTCACCTTTAAGATCACCGTGGGACCAGAACATGGATACCTCATCAATCTGGGTACAGGCAACGCTACCGTCACCACATTCACTCAAGCTGAAGTTGATGACATGAAGATTTGCTACGTGCTAAGGGATGGCCACAATGCTACGAGCGACATCTTCTTTTTCTCCATTGAGGACAATGgaggcAACAGGCTGAAGAACCAGGTGTTCAGGCTGAACTGGGCCTGGGTCTCCCTGGAGAAAGAGTACTATGTGTTGGACGAGGAGGCTAAGTACCTGGAGGTGGTCCTCAAACGACGAGGATACCTGGGAGAGACATCCTTCGTCAGCATCAGCACCAGAGATGGTACGGCGGAGAAGGATAAGGACTTCCGTGGTAAAGCCCAGAAGCAGGTCCAGTTTAACCCAGGTCAGACCACGGCCACATGGAGGGTGAGGATCCTGCAGGATGGAGTGTACGAGCAGTCTGAGACCTTCCAGATTGTTCTGTCAGAACCTGTCATGGCTGCCCTGGAGTTCCCTGACACAGCCACTGTGGAGATCCTCGACCCAGCTGATGagTCGACAGTGTTTATCCAGTCTGCAGTCTACTCTATAGAGGAGGACATCGGGGAGCTGCTGATCCCAGTGCGCAGGAGTGGTGACGTCACACAGGAACTCATGGTCATCTGCTACACACAGCAAGccaCAGCTACAGGGACCATcccctctacagtcctgtcctacTCTGACTACATATCCAGACCTGAGGAACACAACAGTGTCCTGCGCTTCGATAAGGGCGAGACAGAGAGTTCCTGTCGTGTGGTGATCATAGATGACTCTCTgtatgaagaggaggagagcttCAACGTTACCCTCAGTATGCCCATGGGAGGCCGTCTGAGACAGGAGTACCACACTGCCAGGGTCACCATCATACCTGACCTGGACGACGCTCCAGTATTCTACTTCGGAGGCACAGACTACCGTGTGGATGAGAGTGATGGTTATGTGGAGGTCAAGGTGTATAGGACAGGCACTGACCTCTCTAAAACAGCCACAGTCACTGTACGCTCCAGGAAAACAGACCCTGTATCTGCTGAAGccggTGTGGACTACGTCGGTAtcagcaggaacctggacttcgcCCCGGGGGTCAGCCAGCAGACATTCAGGGTTACCATCCTGGATGACCTGGGTCAGCCGGTGCTGGAGGGGACCGAGACATTCGAGCTGATCCTCCGCATGCCCATGAACGGCATCCTGGGAGAACCGGGGAAGGCCACCATCCTCATCAACGACTCCGTCTCTGACCTGCCCAAGGTGCAGTTCCATGATGCCATGTACATGGGGCATGAGAACTCCGGTCAGATCTCAGTCGTGGTGTATCGTAGTGGTGACATCAGTTACAGGTCAACGGTCCGCTGTTACACCAGACAGGGCACCGCTCAGGTCATGATGGACTTCAACGAACGACCCAACACAGACGCTTCCATCATCACCTTCCTACCAGgGGAGGTGGAGAAGCCGTGTGTTCTGTCCTTGGTTGATGACACGGagcatgaggaggaggaggagctgaggCTGGTGTTGGGGTCGCCCCGCAGTGAGTCTCCGTTCGGAGCATCCATCGGGAAACAGAATGAGACTCTGGTCAAGATCAAGGACGAGGCAGACAAGGCCATCATCAAGTTTGGGGAGACTAAGTTCAGCGTGAGTGAGCCTAGCGGGGCAGGTCAGGTGTCCATGGTGAAGATCCCAGTGCTGAGGGTAGGAGACACCTCCAAGGTGTCTGTGGTCCGCGTCCACACCAAGGATGGATCAGCCACCTccggagaggactaccatcctgTATCTGAAGACATTGAGTTCAAGGAGGGTGACACAGAGCACTACATCGAGGTGGAGATCTTGTATGATGGAgtcagagagatgagagaagcaTTCACTGTCCACCTGAAACCTGATGAGAACATGGTGGCTGAGACGCAGATGAATAAGGCCATTATCTACATAGAGGAGACCAACAGCATGGCGGACGTCACCTTCCCCTCCGTCCCCCAGGTGTTCTCCTTACTGCAGTATGACGACACCTCCAGGGCCAGAAATACCCCCTTGGTGGCAGGCTACCCCGTCGTCTGTGTCACGgctTGTAACCCTAAGTACCCTGACTATGACAAAACTGGCTCCATCTGCACCAGCGAGCACATCAATGACACGCTGACCCGCTATCGATGGTTGGTCAGCGCTCCAACCAGCCTGGACGGGGTCACCAGCTCCATGAGAGAGGTGGACTTTGAtaccttcttctcctcctccaagATCATCACCTTGGACTCTGTCTATTTCCAGgcTGGCTCTAGGGTGCAGTGTGCAGGCCGGGCTGTGAACTCTAACGGAGACGAGGGCCTGGAACTCAGCAGCTCCATAGTCTCCATCAGTATAGAGAACGGTATGTGCCAGCCTCGTGTGGTGGGTACAGTGGGCGCTGAGCCCTTCTCTGCCAAGCTACGCTACACCGGAGCAGAGGACCCAGACCACCCCAACCTCATCAAGATCACTGTCACCATGCCACACATAGATGgcaTGCTCCCTGTGGTCTCCACCCGTCCTCTGTCTAACTTTGAGCTGACGTTGAGTCCTGATGGTACTCGTGTGGGGAACCACCGCTGTTCTAACCTGCTGGACTTCACCGAGGTCAAGACCCGCCACGGCTTCATTACAGACGCCACCAAGAACCCTGAGGTGATCGGGGAGACCTCTCCCTACCAGTACAGCGCCCCCCTAAGGGGATCCAGCATACTGCGCTTCTACAGGAACCTCAACCTAGAGGCTTGTCTATGGGAGTTCACTAGTTACTATGACATGTCTGAGCTACTGTCAGACTGTGGAGGGACCATCGGTACAGACGGACAGGTGTTGAACCTGGTCCAGTCCTATGTGACCCTCCGGGTGCCCCTCCATGTCTCCTATGTGTTCCACTCCCCGGTGGGGGCAGGGGGCTGGCAGCATTTTGACCTGCAGTCTGAGCTACGACTCACCTTCGTATACGACACTGCCATCTTGTGGCGGGACGGCATCGGCAGCCCTCCTGAGGCTGAGCTACAAGGAGCCCTGTACCCCACCAGTATGCGTATCAACGAACAGGGTCGTCTGGTGGTCAACTTCAGAACAGAGGCTCGATTCAGAGGACTGTTTGTCATATCACACTCTGCGTCCTCTCTGTCGTCCATGGTGATGTGTGCGGACCACCCTGGGGTGACCTTTAACCTCAGCCTGGTGAGGAGCGAGCCCACCTACAACCAGCCCATGCAGCAGTGGACCTTTACATCAGACTTCGCTgtgcGTGACTACTCAGGTACTTACACAGTGAAGCTGCTGCCCTGTACCTCTCCCCCCAGTCTGGAGTACTCCCTGCCTCCTGTCTGTAACCCCAGAGAACCTGTCACCTTCGACCTGGACATACGCTTCCAGCAGGTGAGTGACCCGGTTGCGGCTGAGTTCAGTCTGAACACTCAGATGTTGCTGCTGTCTAAAAGATCTCTGTGGCTGTCTGATGGATCCATGGGCTTCGGACAGGAGAGCGACACCGCCTTCTCACAAGGGGATATGATCTATGGCAGAGTGATGGTGGATCCAGTCCAGAACCTGGGAGATTCCTTTATCTGTAACATAGAGAAGGTGTTCCTGTGCACTGGCGCGGATGGATACGTGCCCAAGTACAACCCCAACAACAATGAGTATGGCTGTCTGGCTGATGCTCCCTCGCTGCTCTATAGATTCAAGATCATCgataaggcccagccagagacccagGCCAGGTCGTTTGGTAACGTGGGGTTCAGGGCTCTGCTGGCTGTAGACGACCCTCAGGCCCTGGCCCTGGTCAGACAGCCTGGATCTGACGGCTTCAGCATGGACTCTACAGCACTGTTCCAGGTGTCAGCAGGGAGAGAGTGGTTCATCCACACCATCTACACTGTCCGCTCcagagagaatgccaacaggggCATCGGGAAGAGAAGTCTGGAGTACCACACACTCAGCCAGCACAGCAGTATGTCTGCAGGAGGCCACTCCCTGACCCAACACAGCAGCATGGACAGAGAAACCCAGCGTCAAACTATGTCTGCAGGAGGAccgtcccagtcccagtctcgcTCCAGGCGGTCAGCAAACGGGGTGCCAGACCTAACAGAGGACATCGGCCTGGACAACAACCGTGGCACCAATATTCTCCATATCTCCCTGGACCTTAGCCTCCAGCGCCGCACCAGCCCTGACCGGGAGGTCCTCACTCGGGGTGTGGTGCCCAGGGAGCTGAACCATCCTGTGGAGAGCGAGGACGGCCTGGTCTTGATCATAGGGATCCTGGTGGGCCTCCTCCtcaccatcctcatcatcatcgtcatagTGCTAACCGTACGGTCCAGACAGGAAAAGAAGAAGATGGAGGTTCCCACGGCAACGTCATGCTCCACTGAGCCCATGATAACATCAGGGTTCACTAGCGGTGGCTTGGACAGCTCAGAGGTCTGATAGACAGACTTCCT

Function

NR:

description
PREDICTED: FRAS1-related extracellular matrix protein 2-like

GO: NA

KEGG:

id description
K23380 FREM1_2; FRAS1-related extracelluar matrix protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964988.1 True 9637 mRNA 0.54 26 17670454 17780391

Neighbor

gene id symbol gene type direction distance location
si:dkey-56d12.4 NA coding upstream 186325 17481701 ~ 17484129 (+)
LOC110507111 LOC106581013 coding upstream 292121 17321743 ~ 17379119 (+)
LOC110507110 LOC106581014 coding upstream 349173 17293322 ~ 17321281 (+)
dcnl4 dcnl5 coding upstream 383299 17266189 ~ 17287155 (+)
LOC110507657 LOC106581017 coding upstream 410055 17247306 ~ 17260399 (+)
LOC110507666 LOC106581002 coding downstream 5884 17786275 ~ 17814495 (+)
brip1 brip1 coding downstream 420405 18200796 ~ 18243226 (+)
LOC118944759 NA coding downstream 588872 18369263 ~ 18378985 (+)
LOC110507678 LOC106612861 coding downstream 966804 18747195 ~ 18770034 (+)
LOC110507679 ripl1 coding downstream 990435 18770826 ~ 18789238 (+)
G2057854 NA non-coding upstream 1377 17668695 ~ 17669077 (+)
G2057839 NA non-coding upstream 20674 17649459 ~ 17649780 (+)
G2057825 NA non-coding upstream 45885 17624275 ~ 17624569 (+)
G2057813 NA non-coding upstream 60074 17607487 ~ 17610380 (+)
G2057810 NA non-coding upstream 60736 17606062 ~ 17609718 (+)
G2057943 NA non-coding downstream 89977 17870368 ~ 17870614 (+)
G2057950 NA non-coding downstream 103970 17884361 ~ 17884605 (+)
G2057958 NA non-coding downstream 118176 17898567 ~ 17900322 (+)
G2057960 NA non-coding downstream 122840 17903231 ~ 17903470 (+)
G2057962 NA non-coding downstream 123723 17904114 ~ 17904324 (+)
G2057804 NA other upstream 84530 17583970 ~ 17585924 (+)
G2057788 NA other upstream 104070 17555504 ~ 17566384 (+)
G2057561 NA other upstream 453911 17213110 ~ 17219017 (+)
LOC110507087 LOC106612902 other upstream 1260085 16391021 ~ 16410705 (+)
G2056820 NA other upstream 1294411 16374266 ~ 16376043 (+)
G2057945 NA other downstream 93410 17873801 ~ 17875832 (+)
G2059435 NA other downstream 790708 18571099 ~ 18594842 (+)
G2059714 NA other downstream 1311556 19091947 ~ 19092272 (+)
G2059777 LOC106581039 other downstream 1413066 19193457 ~ 19195184 (+)
LOC110507725 LOC106581066 other downstream 2277852 20058224 ~ 20059968 (+)

Expression


Co-expression Network