Item | Value |
---|---|
gene id | LOC110507689 |
gene name | LOC106581036 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048591.1 |
NCBI id | CM023245.2 |
chromosome length | 51556237 |
location | 18956560 ~ 18991625 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021587841.2 | False | 6970 | mRNA | 0.48 | 21 | 18956560 | 18991623 |
TU2355514 | False | 2325 | lncRNA | 0.40 | 2 | 18989281 | 18991625 |
TU2355516 | True | 2265 | lncRNA | 0.40 | 2 | 18989341 | 18991625 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110507687 | LOC106612851 | coding | upstream | 16521 | 18935541 ~ 18940039 (+) |
LOC110507685 | LOC106581023 | coding | upstream | 72254 | 18861823 ~ 18884306 (+) |
LOC110507684 | LOC106581033 | coding | upstream | 107288 | 18838232 ~ 18849272 (+) |
sarm1 | LOC106612856 | coding | upstream | 136329 | 18805170 ~ 18820231 (+) |
LOC110507680 | LOC106581030 | coding | upstream | 159708 | 18789552 ~ 18796852 (+) |
LOC110507690 | gosr1 | coding | downstream | 651 | 18992274 ~ 19047785 (+) |
LOC110507699 | LOC106581044 | coding | downstream | 357147 | 19348770 ~ 19383505 (+) |
LOC110507698 | LOC106581045 | coding | downstream | 401994 | 19393617 ~ 19407557 (+) |
LOC110507701 | LOC106581046 | coding | downstream | 421048 | 19412671 ~ 19439667 (+) |
LOC110507703 | LOC106581047 | coding | downstream | 448397 | 19440020 ~ 19502535 (+) |
G2059610 | NA | non-coding | upstream | 32966 | 18923086 ~ 18923594 (+) |
G2059594 | NA | non-coding | upstream | 101362 | 18853566 ~ 18855198 (+) |
G2059402 | NA | non-coding | upstream | 356386 | 18532495 ~ 18600174 (+) |
G2059416 | NA | non-coding | upstream | 404952 | 18549765 ~ 18551608 (+) |
G2059380 | NA | non-coding | upstream | 446631 | 18508219 ~ 18509929 (+) |
G2059717 | NA | non-coding | downstream | 102459 | 19094082 ~ 19094319 (+) |
G2059719 | NA | non-coding | downstream | 104075 | 19095698 ~ 19095944 (+) |
G2059722 | NA | non-coding | downstream | 106866 | 19098489 ~ 19099017 (+) |
G2059723 | NA | non-coding | downstream | 113139 | 19104762 ~ 19104971 (+) |
G2059737 | NA | non-coding | downstream | 139904 | 19131527 ~ 19131743 (+) |
G2059435 | NA | other | upstream | 361718 | 18571099 ~ 18594842 (+) |
G2057945 | NA | other | upstream | 1080728 | 17873801 ~ 17875832 (+) |
G2057804 | NA | other | upstream | 1370636 | 17583970 ~ 17585924 (+) |
G2057788 | NA | other | upstream | 1390176 | 17555504 ~ 17566384 (+) |
G2057561 | NA | other | upstream | 1740017 | 17213110 ~ 17219017 (+) |
G2059714 | NA | other | downstream | 100324 | 19091947 ~ 19092272 (+) |
G2059777 | LOC106581039 | other | downstream | 201834 | 19193457 ~ 19195184 (+) |
LOC110507725 | LOC106581066 | other | downstream | 1066620 | 20058224 ~ 20059968 (+) |
G2061226 | NA | other | downstream | 1313759 | 20305382 ~ 20306608 (+) |
LOC110507744 | p4ha3 | other | downstream | 1713306 | 20697519 ~ 20708634 (+) |
G2059661 | NA | non-coding | upstream | 22441 | 18966322 ~ 18966840 (+) |