LOC110507698 (LOC106581045)


Basic Information

Item Value
gene id LOC110507698
gene name LOC106581045
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 19393617 ~ 19407557 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587852.2
AAAAagtaatacataccatacgaaacctatcatactaaatggagggtCCCGGGTTAACATAAAGAATCATtctaaatgctctgagaccaggttgaataTCAATGATTGACCGTCTTAATTCTTGGCCAATTAAGCCTCATTATTGTGCTAAATGTTGCGAAAAAAATGAAACGTAGATAATTTCCATATAGACATAAGAGCTAGGCCTATCCATCAAGCCTAGCAAGACATTGCCATCCCCCATCAGGTCTGAAATGACTGGCCTATGTCAGATTGTCTCAGGGTGACGCATGTCCAGAGCAATGtccctgtccatggtgctgaaattgaGGCTTGTATTTGCCGTGCATATTCTCAAAGTAGCCCATATGATTTCGTAAGAACCCTGGCACGGATAAACAGGCTTTGGTGTCACCCAAACAATTGTCTTATCAAAAGTACAGTCATTTTAACATTCATAATAAAGACTACCCTGTCCTATCTCTGCCTTTGAACTACTGCTATAACGATCCTGGCAAAAGTCGATGTTGGGTACGGCCACTTCTTTCAATAAGCTGGATTTGAGTCGTATGATCATCTCGGGTGTTCCGGTCACGATGTCTTGTTTTCATCATACGACAGTAGACTACTGTACCAGCTCAACCCAACAGACGATGAAGGAGAGGGAGGCTGCGCCTGTCGAAATGTATCGTGCTCCGTTTCCATACGTTACAATCTACTTGCTATGTTGACCTTGTTATGAGTATTTTGGCAATAACTGTTACTGACGCAGCGAGATGGTGCAGCAGTAATGAAAACATATTTATCCTGTTGTAGCCTCCCAGGACCGTTATGCGATGCGTCGCTGATTTTTTTCTGTGTACAGGCTATCATCTTTTGTTCTTGATACAACGTTATCGCCTGCAAATGATGTTGAATTGATCTCAATTATTGGACGAATATCCTAAATGGTTTTGGAACATTCCTGGAAATCAATCATGTATGGATCGAAGGACTTGTTTATAGATCTCATGAATTTCATATCGTAATTCTTTGGGACTCCGTTCGACATTATCTAAAATAGCACGGGTGCAGGACAGGTGTGTAATCATGGAACCTACAGGCTCCACCTTGGACATGCAGATGGAGAGTGTTGAGAGGAGTACAGTGTTTCTCAGACAGGAACATCTCACCCTACTGCATGGCCTACACCTGGAGatcctgtccttgcagaaacgATGTAGCGAGTTGACATGTGAGCTGAATGTGAAGCCTCCAGGCAAGAGTGAACTGGAcctggcggaggaggaggagcagctggAGGCCCGCTGTCTGGAGGTCGAAGATCGCCGGGCCGAGCAGCAGTGCACACTGGGAGAGCTGTGTAAGGAGCTGACTCACAAGGGGGCGCTGGTTGGTGCGCTGCGGGCTAACCTCAAGGACAAGGAGCGCCGCTTCCTGGATGAGCTGAAGCGCCGCAGCCAACGCTCCACGGTGCTCAACACAGAGCTGCAGAGGCAGACCGAGGCGGCAGCCTACCTCTCGTTCCAGCTGCATGCTGCCCGACAGAAACTGCAACACCAGCGGCTGCAGCAGAGGCAGCAGGCCCTCAGGGAAAACTGGGAGAATAGGGATCGTCATCATGGGAATCCCCCTGGGCCCCAGTACAGCCAAGCAGCCGAGTGGGACACCGCCATCTTTTCTCCCTTTTCTCCTCAGTCGCCCTCCGGTTTCTCCAAtgcctccaacaccagctctgccaTAGCCTCCCCTGTGGTCAAGCCTAAACGCAGGGGCAGCAGGACCATGTCAGGGCACCAGCTCCGGGCGGAGAGGGCCAGGGAGTGTGTCCCCAGGGAGAGGGTGACGTGCCCTGCAGAGCCCACCGCCATGCCTGACCCAGCGCTGTTCCTCCACCCTCACCGCAGGCACCACAAGTCCAGGGTCAGGCATTCCTACTCCCTGGCCCACAGACAGAATCCTCtggtgggggaaagaggggaggaggaggggggtggagaggggcCCATGGAGCCCCAGGACGGAGCTCCTCCCAGACTGGCAGCCACTGCCACAGCGTCACCTGCTGGCTGCTCAAACCAAGGCTGAATAACTAGCCCCACTGTGACCATCCCTAGAaatgcatcatcatcatcatcactattatCATAAtcattgtcatcatcatcatcatcgctaTCCTCATAATCACTATGACTATCTGATTTTATTAATACTGTAAATCGCCCATTGTCCTGCACCATTGTCGAATTGATACTGAGATTAATTTAGCATTGTTGATTATAATCCTATTAACTGGTATTTAGTTGTATTGCTATGATGAATACTTTTTATAATTATACATTTTGACATGACCTGAATTAACCCAAACTTCCAGGTTTACGAACACCCAATGAGGATGTTGTTACTAATCACTTCACGTCAATGTGTAGAATCTTGTAGTTGAATGCATTTACACAGGCGTCGCTCTATATAACGTTATTATGGGGCCTTATCCGAGTGTGACATCCTGTGTGGAGGTTAGTTTAACCTATGGCCTGTTGCCATAGACCACAGCGCCTACTGTGCAATTACCTTACCCTGCTGTGTCGTTTTAGGGCCAACCATAAATCAACCCTGGGTTGCCcttgaaaaaaacattttctgacCTCTGTTACGCTGAGTCACAGTTGGGTAGCGTCTGAGCATCTGTGTATGTCCTTGCTGTGAATACTATTGAATTTCAGATCTGCATCAGTGGCCTTCACTTGAAAAGTTCCCACATGGCCAAGAGGTGTAGTCATACCGTCATATCCCACTGAATCTTTCTTTATTCCATTGGTCATACAATAGGTAGGCCTACAGCACACCCAATATGTTATACAATAATTGAAAGTAACATTAGTCCACTGGCCTCACACACAGATCTTAGTAGGTTTCAATTATATTGTGTCTCTGAGCTTTAAAAAAACTACAAATATTATCAAACACTGATGAAGCTATTGGATGAGTTAAACTGGAGTTCCTGGCATCCTGCATAAATAGGTGGAGGTATAGGTAACCTTCTAATCTTGCATAAACAGGACACTTTTGGGTAATAATGCATTGGGACCAGTTTGGCCAGATGCTTCTCTCAGGTTTAGTGAGCTGTGTGTAATACTGTACACAGAGAATAGTTTTTCTCTGTGTTTATTTACATCTGTGGTTTGCTGGGGGGGTTTCACCTTAGGGATAAAAGACACATAAGAATGTTGTTTATAGATGGTATGTGTAACGATCCTCTTCCTGTAAATGACTGGACCAAAGCgtagcgtggtacatgttcatgatattttattaaatcagaacacttgaacaaaactaacaaagaagaaaacaaacagttctgtaaggaaactaaactatacagaaaacaactacccacaaaaaaccctgtgggaaaaagctacctaagtatggttcccaatcagagacaacgatagacagctgtccctgattgagaaccatacccggccaaaacaaagaaatacaaaaacatagaaaaaggaacatagaatgcccacccaaatcacaccctgaccaaaccaaaatagatcAGGTCAGGGCAGGGCGTGGTCAGggcaggtcagggcgtgacagtttgttgctgtttgttttgggttGAACTTCGGCTGTGGCTGATTTGATCTCACTATTACTAGTCAAGCAAAAAGGGGTTATTAGGGCCTTCTGGTAGATTTGTCTCTTGTCTCAGATAGCTGAGAAGAGAAAATTCTAATTTTCTTAAATAAAGGGGTAATTTTGGTTATCTACATGGTAGACTCCAAGCTGTGTAGACAGCCATGACGCTATGAAACCAGCCAACATTGATTTGCACTTGGCTGACCCTAGTGGTGTAGTGAGAGAATAGCACCCAACCAGATGAAGCTGTGTGGTGTCACTTGATCCGAACATTTAACCTAGTCTCTTTTCCTTTTAATTGTCTTTCAGTTGATGAAATTGGTGGATTTTAACATCAGATATGCTTACATTTTGAAACCATTTATCTTGGTAGGTAATATATCTTAACCCTTATATGAATGTACATATATCATCTGATAATAACTCAATATAACACAGAGGTAATCtttttagtagacactcttagCCAGAGCAACTTTCAGTAAGTGAGTACATACTTTTTCacactggtcccctgtgggaattgaacccacaaccctggtgttaacagcgccatgctctaccaactgagccacacgggaaaTGTTGTCAACAGGTTATTTAATACAAAATATTTCTTATTAATCAATATAAAATGGAATACTGTAAAAGCTATTAGAAGGATATGTTTTAATATGATTGTTTTAACTTAATCTTTTTTATGACTTATTTAACTGATTGTTTAATATATTATGTTTATTATATCACAGAATGTTATAAAACTATTTTCTGTATTTATCTGTCTATAAGGCATTTGGAGGAGGTATTGTCATGGAATGCCTTGAAGAAGAGAAGATGGGTTGAATTCAGTGCAGACATTTAACATGGTTGTTTTTTACAGTGTAAGAAGAGCTGCCTCATTACTGAAAAGCCATGAACTTAAACCGTTGCTGGCAACAATTGCTGTCAAGCCTCCCAAAAAATGGCTGTCACTTTCATTTTCTGTGTAGAAAAATGTCCAGATTCATGGTCAAGGCTTCCATAATGGCCCTTAACCCTTAGCCTGCAAGCAAGCAATTTATCATGACTGTGCACTATTTCCTCAGCTTCTGAGAACACATTCCCCATTCAATATCGAAATGACAGTAACATGACAATCCTCATTGAAAATGTTTATAGAGTACATGTTCTTCTTAGGGAACTAGAAGTTAGAGTGTTCAGCTTTCATGTAAAGCACATGTCCTTGGATGATGTACTTGTGATATACCTGTGCTTATAGTGGTGTCGGTACAGATGTGGTCTGTGGCTAGAGCCAGCTATGTCCAAAAAATATCCTTACTTTCACACGGACACATTCCACTTTACAACTAAGCAATAAGAACAGATAAAACTGACACTTCAAATCTTACACATTTTGGACATTGAAATATGTAAGTGACACGCTGATATGATATCATATCACAGACAAATAACGAATGAAAACACTATCCCTTTATTCTTAATCAAATAGCTAAACAGCTTTGATACACTGTTGAATCAGATTGTGGTGAAAAGTGTCTTATGACGACAATGATGAGCCAAAGAGGCCCAACACAGTTGTATGGTGTTCTGCCTTAGAGTAGTCCTGCTGTGGCCATGCTGTGTAACGTTGCAGCATAGCCATGCACAATTACATAGAAAAAAAACTAAACGTACCTTGTCTGTCATGAATGTTGAAGAAAATGATATTTGAATTTACTCTGCCAATTGTCCGTGGGTCGaaatttgagacaaaatatccacaggaaagcaTTATTAAACCAACTTCGAAACGCGGGTGGGTGGCAATCAATATTTGTTTGCTCGTGACCTAAGGCATGTGCACAATATGGAATTACATGCACAAGATACATGCATACTAACCAAAGTCGTGCCAGGTGATAGAAATTGCAACGGCAGTACTGGCGCTCTAAAAAGTTGGGTAaataatactttcctgtggatattctGAAGGACCAACCTCACAGATAAGATATTCAAGTTCAAATGTAATTGTATtgaacattctggcttgtaaggaAACTTTTTTTCAGACTGTATACCAAGAATTGGTATCAGTCTGATTTATTAGGCAAGCCTTGTTCTCCTCTTTCTGAATACCAGGAGAGGATGAGTCTTAAAAGTATTTTGTTGATTCGTCATAGAAAACTCAGATCTTCCCCTTCTGCTCTCCTTGATTCCTTCTGATCCTTTGAGGAGGTGGAAAGGAGAACAGACACAAGGAATCGAGCAATGACTTTTGAGATCACCCTGCTATCCTCACTTCTATCTTCTATCTGGTTTCCAATTCCACATTTACTAAAATGTTTCTCTATCCATTTACTCACTAGCGTGAAGAAAATGAGGATGAGGGAGACATTTGAATGAATTTCCCCTGCTGAGTATGTATTCCATTTTGAGGGAGGAAGGTTTTTTAGTGTAAAAACTCTCTCGCCATTGGCGCCCAGAGGTCAATCCTGACAGAAGCCAGAGGTCACAGAGGTAAATCCAAAACATTAGTTCATACTAGTGAATTTCACCATCACCTCATCGCGAGACCATGAGCCTGAGTCATGTCCACTACATGGGCATTTTAATAAGTATTAGTTTTCTTCTTGTTTGATATGTTCAGTCTTTTCAAGCAATAAAAAGCCCCCACTCTATATGTTCCCTCAGGCATACAACATAAGATATGTAGTGAGACACTCAGTGCGCCTCCTCTCAAGACCATGAGGGGTGTTGTGTCATACGGTCCCGTGCTGAGCGCCCCCCACCTCCGTCTTTAGCGCACTACTGTGTTGGCTTGCTGTAGAGTATAGAGCTGTACACATTATCCAAATAAAATGTAGGATTGAC

Function

NR:

description
uncharacterized protein LOC110507698

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587852.2 True 6513 mRNA 0.43 4 19393617 19407557

Neighbor

gene id symbol gene type direction distance location
LOC110507699 LOC106581044 coding upstream 10112 19348770 ~ 19383505 (+)
LOC110507690 gosr1 coding upstream 345832 18992274 ~ 19047785 (+)
LOC110507689 LOC106581036 coding upstream 401994 18956560 ~ 18991625 (+)
LOC110507687 LOC106612851 coding upstream 453578 18935541 ~ 18940039 (+)
LOC110507685 LOC106581023 coding upstream 509311 18861823 ~ 18884306 (+)
LOC110507701 LOC106581046 coding downstream 5114 19412671 ~ 19439667 (+)
LOC110507703 LOC106581047 coding downstream 32463 19440020 ~ 19502535 (+)
LOC110507704 LOC106581049 coding downstream 114609 19522166 ~ 19537134 (+)
LOC110507705 LOC106581049 coding downstream 134256 19541813 ~ 19571142 (+)
LOC110507707 NA coding downstream 182223 19589780 ~ 19591282 (+)
G2060321 NA non-coding upstream 4331 19383639 ~ 19389286 (+)
G2060314 LOC106581042 non-coding upstream 68029 19315067 ~ 19325588 (+)
G2060312 NA non-coding upstream 79995 19312903 ~ 19313622 (+)
G2060296 NA non-coding upstream 94264 19297432 ~ 19299353 (+)
G2060299 NA non-coding upstream 97529 19295508 ~ 19296088 (+)
G2060397 NA non-coding downstream 108683 19516240 ~ 19516570 (+)
G2060398 NA non-coding downstream 109447 19517004 ~ 19517341 (+)
G2060399 NA non-coding downstream 111458 19519015 ~ 19519444 (+)
G2060402 NA non-coding downstream 116849 19524406 ~ 19524648 (+)
G2060325 NA non-coding downstream 119730 19527287 ~ 19527777 (+)
G2059777 LOC106581039 other upstream 198433 19193457 ~ 19195184 (+)
G2059714 NA other upstream 301345 19091947 ~ 19092272 (+)
G2059435 NA other upstream 798775 18571099 ~ 18594842 (+)
G2057945 NA other upstream 1517785 17873801 ~ 17875832 (+)
G2057804 NA other upstream 1807693 17583970 ~ 17585924 (+)
LOC110507725 LOC106581066 other downstream 650686 20058224 ~ 20059968 (+)
G2061226 NA other downstream 897825 20305382 ~ 20306608 (+)
LOC110507744 p4ha3 other downstream 1297372 20697519 ~ 20708634 (+)
G2062402 NA other downstream 1737654 21145211 ~ 21146366 (+)
G2062531 NA other downstream 1872603 21280160 ~ 21281860 (+)

Expression


Co-expression Network