LOC110507704 (LOC106581049)


Basic Information

Item Value
gene id LOC110507704
gene name LOC106581049
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 19522166 ~ 19537134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110507704
ATGGAGCTATGGGCGCTATGGGCGATATGGAGCTATGGGCGATATGGAGCTATGGGCGATATGGAGCACTGGGCTATGAGTGATATGGAGCTATGGGCGATATGGAGCTATGGGCAATATGGAGCTATGGGCGATATGGAGCACTGGGCTATGAGTGATATGGAGCTACGGGCGATATGGGGCTATGGGCGATATGGAGCTATGGGCGCTATGGGCGATATGGAGCTATGGGCGATATGGAGCTATGGGCGATATGGAGCACTGGGCTATGAGCTGAACTTCAAGGAGCCAGAGGCGGTGCGAGCCCTGACCTGTACCCTGCTGAAGGAAGACTTTGGGCTGACCATGGACATCCCTCTGGAGCGTCTCATCCCCACCGTGCCTCAGACTCAACTACATCCACTGGGTGGAGAACCTGGTCGGAGGCCAAGGGGAACCACGCAGGGGCATCGACATCGATACTGGAGCGTCCTGTATCTACCCCCTGCTGGGAGCCTCTATGAATGGCTGGCATTACCTGGCTACTGAGGTAGATGACATCTGCTTTGATTACGCCACCAGGAACGTGGAgcagaacaacctctcagaccTCATCAAAGTTCCCCAGAAGACCCTATTAATGGACGCTCTAAAGTCAGCCATTGTCTATGACTTCTGCATTTGTAACCCTCCCCTCTTCGCCAACCAACTAGAGGCTAAGgGGGTAAATTCCAGGAACCCTCGTCGTCCTCCCCCCAGCTCAGTGAACACAGGTGGGGTGACAGAGATCATGGCTGAGGGCGGAGAGCTGGAGTTTGTCAAGAGGATCATCCATGACAGCCTGCAACTCAAGACACGCCTCAGATGGTACAGTTGCATGTTGGGAAAGAAGTGCAGCCTGGCACCTTTGAAGGAGGAGTTGAGACACTTAGGTGTGCCCAAAGTGAACCACACAGAGTTCTGCCAGGGACGGACAATGCACTGGGCTCTGGCCTGGAATTTCTATGATGACGTTACTGTTCTGTCTCCCCCCAGTAAGGAGAGGAAACTGGAGAAGTCTCGTAAGCCACTGTCCTTCATGCTGCTGCAGTCCCAGGCCTCCTCTATAGGCTGACCCTCCAACCCCAGGCCCGTGGAGGCCATCACTGCCTGGCTAGAGAAGACACTCAGTGACCTAAAGGTGCTACACAAGCGTGTCCCTTGTGGGAGGAAGGAGCAGAGTCTGTTCCTGACATCTGTGGAGAACACCTGGATCCACAGGAGACAGAGATGCAGAGACCAAGGCTGACACCTCAGCTGCCCAGAGCGCCCCCCAGTGGTACTTCCACCACTCTTTCCTCAGCCACAGCCCAGCACCCACAGagcctgcagcactccactacaCACATCCCATATAGCTCACACTCAGATTTACACTCCCACAGCAGCACAGGGGCCAGGCAGTGTTCCACAGTCCGGGACCAACAGGGCAGATGGAGTCAACTCTCAGGGGGTCAGCTGTGTCCCAATAGAGGACAGCGGAGGATGTCATCATGGAGTCTTCTCCTACCTCTACAACACCCAATATCACATTGGCACAGACAGCACTACCCACCACGACACAAACAGGAAACCACGCCACAGGAAGTACCTGCTGAAACACAGGAAGAGGAAGTCGGTACCACTGGATAGGAAGTGATGCAGCCACAGAGCCCCAGTGTTGTACAACACTTCCTATTCAAGTGCTTGGTGAACATGAAGGCTGAGGAGCAGGACGTTGCTGTGGAGATCCACTGGGTGGAAGGCCAAAACAAGGACATGCTGAACCAACTGGACCTACCTGAAGAACACTGCTTAGAGTGGTGGCCAAGCCACTGGGGATATAATGGAATATAGTTGACCTGTAGTACTGGGTCGCGTTCACTCAGCGAGAAAATAGAAAAACAGGCAGGGACTTTGAGAACATAATTTACCGATATTGTTCTGTCGTGTCCAGTGTTTGTGTAAGATATACTTATTTGCAGGTCCAGTACAGTTTCACTGCAAGTCTCCTTGTAAAGGTTGTAATGACTAGAGCAATGTTTTTGATAAATGTATGTTTTAGTACCATGTTGTGTATTTCCATGTTCAGTCAGTGTTTACACACAGGTAGTCTATCCCAGACATTTGTCTAGGATGCAGCTTCCATAAGCAACCACAAGAGGGCAGTCCATAGCTGCAGCTCATCCACTTGTATCCTGTTGATGAAATATAGCTTTTCTGGGTAGCCACCTATTAGTGGCCTGTCTTAGTATCACAATTAGACGGTCGGTCGTATTGACTTGAGTCGGTAATGAATGAACTTTGCATACACACACTTTAGCTAAAACAAAACCTAATGCAGGATGCCCAGTATTTCGTGTGCCTGTACGCACAATTGTCACATGAGGTCGCAGCCGAACAGACAAACTTCCTGAAAAGGGATTTAGTGGTAAATACCAGGAAAAGTGGACCCAAAGTTCATTTGCCACGTGCACAGGATACCACGGGTGTTAAACACTTCCATGAAATTCTTACCTTGAGAGctcatt

Function

NR:

description
methyltransferase-like protein 16

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110507704 True 2528 mRNA 0.51 10 19522166 19537134

Neighbor

gene id symbol gene type direction distance location
LOC110507703 LOC106581047 coding upstream 19631 19440020 ~ 19502535 (+)
LOC110507701 LOC106581046 coding upstream 82499 19412671 ~ 19439667 (+)
LOC110507698 LOC106581045 coding upstream 114609 19393617 ~ 19407557 (+)
LOC110507699 LOC106581044 coding upstream 138661 19348770 ~ 19383505 (+)
LOC110507690 gosr1 coding upstream 474381 18992274 ~ 19047785 (+)
LOC110507705 LOC106581049 coding downstream 4679 19541813 ~ 19571142 (+)
LOC110507707 NA coding downstream 52646 19589780 ~ 19591282 (+)
LOC110507712 LOC106581053 coding downstream 415087 19952221 ~ 19960896 (+)
LOC110507714 LOC106581054 coding downstream 443873 19981007 ~ 19989638 (+)
LOC118944794 NA coding downstream 444718 19981852 ~ 19981993 (+)
G2060399 NA non-coding upstream 2722 19519015 ~ 19519444 (+)
G2060398 NA non-coding upstream 4825 19517004 ~ 19517341 (+)
G2060397 NA non-coding upstream 5596 19516240 ~ 19516570 (+)
G2060321 NA non-coding upstream 132880 19383639 ~ 19389286 (+)
G2060314 LOC106581042 non-coding upstream 196578 19315067 ~ 19325588 (+)
G2060417 NA non-coding downstream 30040 19567174 ~ 19567467 (+)
G2060422 LOC107663739 non-coding downstream 47490 19584624 ~ 19585104 (+)
G2060455 NA non-coding downstream 105722 19642856 ~ 19646809 (+)
G2060507 NA non-coding downstream 172754 19709888 ~ 19728046 (+)
G2059777 LOC106581039 other upstream 326982 19193457 ~ 19195184 (+)
G2059714 NA other upstream 429894 19091947 ~ 19092272 (+)
G2059435 NA other upstream 927324 18571099 ~ 18594842 (+)
G2057945 NA other upstream 1646334 17873801 ~ 17875832 (+)
G2057804 NA other upstream 1936242 17583970 ~ 17585924 (+)
LOC110507725 LOC106581066 other downstream 521109 20058224 ~ 20059968 (+)
G2061226 NA other downstream 768248 20305382 ~ 20306608 (+)
LOC110507744 p4ha3 other downstream 1167795 20697519 ~ 20708634 (+)
G2062402 NA other downstream 1608077 21145211 ~ 21146366 (+)
G2062531 NA other downstream 1743026 21280160 ~ 21281860 (+)

Expression


Co-expression Network