LOC110507770 (txd17)


Basic Information

Item Value
gene id LOC110507770
gene name txd17
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 21414351 ~ 21419368 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021587998.2
acaaaacaccacCTGCTGGACGGAGACAGATTTTCCGCCGAGTTGGGCCTCTCTCTTTACTTCTTCCTCTCTGGTCGTAGTATTTTAGAAGCGATCATAGTCCAACTCGTTTTTATTCTAGCGTGAAACGATTCATACCTGCTTGCTTTGCCTACGATAATTGATAATACTGCTACTTATTCTATTTCATCATGTCTCATTACGAAGAAGTAAAGGTCCATGGTTATGATGAATTCTGCAAAGCAGTGTCTGAGCGAAAAGGAAAGGACATATTCGCATATTTCTCTGGTGATAAAGACGCTCAAGGGATGAGCTGGTGTCCAGATTGTGTGGAAGCTGAGCCAGTTGTTAGAGGAGAGATGTCCCACCTTCCCGAGGGCTCTGTCTTCATCTACTGTCAGGTTGGAGAGAGGCCATATTGGAAGGATCCCAATAATAAGTTCAAGAAGACTCTGAAGCTCAGTGGAGTTCCCACTCTGATCCGATATGGCACGCCTCAGAAGCTGGTTGAAGAGGAGTGCTTCAAAGCTGACCTGGTGAGGATGATGTTCACCGAGGACTAGAGGACCACACTCGCCCTGCACTGGGTCATCTTCCATTTCCCACTGTCCTGTCTTTTTCCTGAGATCCAGCCCCAACCCAGGCACCTTTTCACTACACTAGATTGAACAGAAATTATTGTTTCTTTGAAATTCAAATACACACTCCTCTCCCTGCGAGGTAGTGGTAATCAGTGAATGTGTTGCTATTCTTACATGGAATTAAAAAGCAACTATAACATAACCAGAGGCCTTGGTAGAGCTAGCTGACTGCTTTTATAACTTGATGTTTAATGTAGTAAATTAAATAGAAGAGTTataataacataatataataacacttTTGACAAATATATTAGATACCCCTAAGTGGTAGGCAGCCTACTCCTAGTATGTGATGTGCCAGATGAATTGATGATTCTTACTTATAGCAGAAATCTttatagtgaagatatcaacTGAAACATTACCTGTTATACTGTGATTGGCGTGTTGTTGTGTAGAACTTagtcaaatgaaataaatgaTGGATGGATGAAAACAA

Function

NR:

description
LOW QUALITY PROTEIN: thioredoxin domain-containing protein 17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021587998.2 True 1083 mRNA 0.41 4 21414351 21419368

Neighbor

gene id symbol gene type direction distance location
LOC110507127 typx coding downstream 587 21327283 ~ 21413764 (-)
LOC110507769 LOC106581179 coding downstream 89926 21318465 ~ 21324425 (-)
LOC110507767 NA coding downstream 100577 21311439 ~ 21313774 (-)
LOC110507126 kiaa0100 coding downstream 102914 21295518 ~ 21311437 (-)
LOC118936433 NA coding downstream 119248 21289993 ~ 21295103 (-)
LOC110507773 LOC106581173 coding upstream 235762 21655130 ~ 21668508 (-)
LOC110507775 LOC106581085 coding upstream 264749 21684117 ~ 21693325 (-)
serpinf2b serpinf2b coding upstream 278945 21698313 ~ 21701463 (-)
LOC110507129 wdr81 coding upstream 282148 21701516 ~ 21730129 (-)
LOC110507777 LOC106581170 coding upstream 422093 21841461 ~ 22067487 (-)
G2062648 NA non-coding downstream 96505 21316807 ~ 21317846 (-)
G2062513 NA non-coding downstream 177301 21236784 ~ 21237050 (-)
G2062494 NA non-coding downstream 211594 21202398 ~ 21202757 (-)
LOC110507761 LOC106581184 non-coding downstream 220567 21147117 ~ 21193859 (-)
G2062729 NA non-coding upstream 1798 21421166 ~ 21421491 (-)
G2062646 NA non-coding upstream 2493 21421861 ~ 21422135 (-)
G2062730 LOC106612783 non-coding upstream 2890 21422258 ~ 21422522 (-)
G2062732 NA non-coding upstream 14104 21433472 ~ 21433677 (-)
G2062734 NA non-coding upstream 15042 21434410 ~ 21434688 (-)
LOC110507765 dynll2a other downstream 141550 21270167 ~ 21273576 (-)
LOC110507754 LOC106581192 other downstream 491976 20913520 ~ 20924130 (-)
G2058724 NA other downstream 3491599 17922342 ~ 17922752 (-)
LOC110507661 LOC106581010 other downstream 3944530 17464437 ~ 17481646 (-)
LOC110507789 LOC106581159 other upstream 1293295 22712654 ~ 22718153 (-)
zbtb16b LOC106581153 other upstream 1384890 22780311 ~ 22808183 (-)
G2065425 NA other upstream 2283795 23703163 ~ 23705965 (-)
G2066096 LOC106581136 other upstream 2344331 23763699 ~ 23765479 (-)
G2066126 LOC106581133 other upstream 2388370 23807738 ~ 23808909 (-)

Expression


Co-expression Network