Item | Value |
---|---|
gene id | LOC110507789 |
gene name | LOC106581159 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048591.1 |
NCBI id | CM023245.2 |
chromosome length | 51556237 |
location | 22712654 ~ 22718153 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: uncharacterized protein C11orf57-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036964878.1 | False | 2253 | mRNA | 0.44 | 6 | 22712654 | 22718153 |
TU2360564 | False | 2551 | TUCP | 0.44 | 7 | 22712663 | 22718106 |
TU2360566 | False | 2225 | lncRNA | 0.43 | 7 | 22712663 | 22718106 |
TU2360567 | False | 2310 | TUCP | 0.43 | 5 | 22712663 | 22717020 |
TU2360568 | False | 2579 | lncRNA | 0.44 | 8 | 22712663 | 22718106 |
TU2360569 | False | 2505 | TUCP | 0.44 | 7 | 22712663 | 22718106 |
TU2360572 | False | 2533 | lncRNA | 0.44 | 8 | 22712663 | 22718106 |
TU2360573 | False | 2338 | lncRNA | 0.43 | 6 | 22712663 | 22717020 |
TU2360574 | False | 2137 | lncRNA | 0.42 | 3 | 22712663 | 22716075 |
TU2360575 | False | 2197 | TUCP | 0.43 | 6 | 22712663 | 22718106 |
TU2360578 | False | 2415 | lncRNA | 0.43 | 5 | 22712663 | 22717020 |
TU2360581 | False | 2628 | lncRNA | 0.44 | 6 | 22712663 | 22718106 |
TU2360582 | True | 2274 | lncRNA | 0.44 | 5 | 22712663 | 22718106 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110507784 | LOC106581164 | coding | downstream | 256236 | 22454409 ~ 22456418 (-) |
LOC110507132 | LOC106613038 | coding | downstream | 301695 | 22389551 ~ 22410959 (-) |
LOC110507779 | LOC106581167 | coding | downstream | 335357 | 22359599 ~ 22377297 (-) |
LOC110507777 | LOC106581170 | coding | downstream | 645167 | 21841461 ~ 22067487 (-) |
LOC110507129 | wdr81 | coding | downstream | 982525 | 21701516 ~ 21730129 (-) |
LOC110507134 | LOC106581157 | coding | upstream | 25681 | 22743834 ~ 22753225 (-) |
LOC110507791 | LOC106581154 | coding | upstream | 36021 | 22754174 ~ 22773846 (-) |
LOC110507792 | LOC106581084 | coding | upstream | 56202 | 22774355 ~ 22778677 (-) |
zbtb16b | LOC106581153 | coding | upstream | 62158 | 22780311 ~ 22808183 (-) |
ncam1b | LOC106581152 | coding | upstream | 92514 | 22810667 ~ 22918490 (-) |
G2064146 | NA | non-coding | downstream | 144790 | 22565546 ~ 22567864 (-) |
G2064123 | NA | non-coding | downstream | 177877 | 22529769 ~ 22534777 (-) |
G2064114 | NA | non-coding | downstream | 191671 | 22520634 ~ 22520983 (-) |
G2063907 | NA | non-coding | downstream | 221494 | 22490949 ~ 22491160 (-) |
G2063906 | NA | non-coding | downstream | 221947 | 22490116 ~ 22490707 (-) |
G2064254 | NA | non-coding | upstream | 1062 | 22719215 ~ 22719816 (-) |
G2064268 | NA | non-coding | upstream | 19573 | 22737726 ~ 22739544 (-) |
G2064422 | NA | non-coding | upstream | 109394 | 22827547 ~ 22830244 (-) |
G2064534 | NA | non-coding | upstream | 254467 | 22972620 ~ 22972831 (-) |
G2064535 | NA | non-coding | upstream | 254773 | 22972926 ~ 22973243 (-) |
LOC110507126 | kiaa0100 | other | downstream | 1408526 | 21295518 ~ 21311437 (-) |
LOC110507765 | dynll2a | other | downstream | 1439853 | 21270167 ~ 21273576 (-) |
LOC110507754 | LOC106581192 | other | downstream | 1790279 | 20913520 ~ 20924130 (-) |
G2058724 | NA | other | downstream | 4789902 | 17922342 ~ 17922752 (-) |
LOC110507661 | LOC106581010 | other | downstream | 5242833 | 17464437 ~ 17481646 (-) |
G2065425 | NA | other | upstream | 985010 | 23703163 ~ 23705965 (-) |
G2066096 | LOC106581136 | other | upstream | 1045546 | 23763699 ~ 23765479 (-) |
G2066126 | LOC106581133 | other | upstream | 1089585 | 23807738 ~ 23808909 (-) |
pcp4b | NA | other | upstream | 1418024 | 24136177 ~ 24181998 (-) |