Gene
RNA
| Item | Value |
|---|---|
| gene id | ncam1b |
| gene name | LOC106581152 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 22810667 ~ 22918490 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neural cell adhesion molecule 1-like isoform X6 |
| id | description |
|---|---|
| K06491 | NCAM, CD56; neural cell adhesion molecule |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021588059.2 | False | 3165 | mRNA | 0.53 | 19 | 22810667 | 22918486 |
| XM_021588060.2 | False | 3162 | mRNA | 0.53 | 18 | 22810667 | 22918486 |
| XM_036964748.1 | False | 3235 | mRNA | 0.53 | 22 | 22810667 | 22918487 |
| XM_021588053.2 | False | 4623 | mRNA | 0.54 | 21 | 22810667 | 22918489 |
| XM_021588057.2 | False | 4569 | mRNA | 0.54 | 19 | 22810667 | 22918489 |
| XM_021588052.2 | False | 4627 | mRNA | 0.54 | 22 | 22810667 | 22918490 |
| XM_021588056.2 | False | 4573 | mRNA | 0.54 | 20 | 22810667 | 22918490 |
| XM_036964746.1 | False | 4642 | mRNA | 0.54 | 23 | 22810667 | 22918490 |
| XM_036964747.1 | False | 4588 | mRNA | 0.54 | 21 | 22810667 | 22918490 |
| XM_036964749.1 | False | 3815 | mRNA | 0.49 | 18 | 22815205 | 22918487 |
| XM_036964751.1 | False | 3765 | mRNA | 0.48 | 17 | 22815205 | 22918488 |
| XM_036964750.1 | True | 3760 | mRNA | 0.48 | 16 | 22815206 | 22918487 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zbtb16b | LOC106581153 | coding | downstream | 2484 | 22780311 ~ 22808183 (-) |
| LOC110507792 | LOC106581084 | coding | downstream | 31990 | 22774355 ~ 22778677 (-) |
| LOC110507791 | LOC106581154 | coding | downstream | 36821 | 22754174 ~ 22773846 (-) |
| LOC110507134 | LOC106581157 | coding | downstream | 57442 | 22743834 ~ 22753225 (-) |
| LOC110507789 | LOC106581159 | coding | downstream | 92514 | 22712654 ~ 22718153 (-) |
| arhgap32a | LOC106581150 | coding | upstream | 245376 | 23163866 ~ 23197366 (-) |
| igsf9ba | LOC106613021 | coding | upstream | 284024 | 23202397 ~ 23276498 (-) |
| thyn1 | thyn1 | coding | upstream | 396652 | 23315142 ~ 23317925 (-) |
| LOC110507816 | NA | coding | upstream | 400242 | 23318732 ~ 23319150 (-) |
| esamb | LOC106581146 | coding | upstream | 411532 | 23330022 ~ 23409999 (-) |
| G2064268 | NA | non-coding | downstream | 71123 | 22737726 ~ 22739544 (-) |
| G2064254 | NA | non-coding | downstream | 90851 | 22719215 ~ 22719816 (-) |
| G2064146 | NA | non-coding | downstream | 242803 | 22565546 ~ 22567864 (-) |
| G2064123 | NA | non-coding | downstream | 275890 | 22529769 ~ 22534777 (-) |
| G2064534 | NA | non-coding | upstream | 54130 | 22972620 ~ 22972831 (-) |
| G2064535 | NA | non-coding | upstream | 54436 | 22972926 ~ 22973243 (-) |
| G2064539 | NA | non-coding | upstream | 56405 | 22974895 ~ 22975100 (-) |
| G2064994 | NA | non-coding | upstream | 65248 | 22983738 ~ 22984016 (-) |
| G2064995 | NA | non-coding | upstream | 66311 | 22984801 ~ 22985119 (-) |
| LOC110507126 | kiaa0100 | other | downstream | 1506539 | 21295518 ~ 21311437 (-) |
| LOC110507765 | dynll2a | other | downstream | 1537866 | 21270167 ~ 21273576 (-) |
| LOC110507754 | LOC106581192 | other | downstream | 1888292 | 20913520 ~ 20924130 (-) |
| G2065425 | NA | other | upstream | 784673 | 23703163 ~ 23705965 (-) |
| G2066096 | LOC106581136 | other | upstream | 845209 | 23763699 ~ 23765479 (-) |
| G2066126 | LOC106581133 | other | upstream | 889248 | 23807738 ~ 23808909 (-) |
| pcp4b | NA | other | upstream | 1217687 | 24136177 ~ 24181998 (-) |
| G2068043 | NA | other | upstream | 2900149 | 25818639 ~ 25834101 (-) |
