esamb (LOC106581146)


Basic Information

Item Value
gene id esamb
gene name LOC106581146
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 23330022 ~ 23409999 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588085.2
GGGTGCAGTCACACTAGCTGTTGAGCAGCCCCTAGCCTAGCTagatgtacgtgtgtgtgcggaCTTGTCCCTCTTGCTGAACGTGTGTTTGCGTTTATGGGGACTGGGGGTTAAGACCCTCTTCTTATAGGGTTATTGTTTTTGTGGACTAGGGATTTGAGACCCTCGTCACGTCACGCTGAGGGGGTTGTCTGTCCGTGTGTGGAGGGggttattctgtgtgtgtgtgtgtgtgtgggggacctAGCTCCAAGCTGGCGGATCGGGAGGACTCAGATTGCTCGGATCAGATGATCCATCTTCAGCTGACCATCTCAGGGGATTGGCCAGCACCCTGTGACTCCCAGCGGGTGGAGATGCCCAGGAGAGAGATCGAGGTGGTGAAGGGTCAGATGGTAGTCCTACAGGCCTGGTACAGCCCCACATCTGATATTGGTAGGAACAGCGTCATCTGGAACTTCATGGCAAATGACTCCAAGCAGgtCATCTCCTACAGTAACGGTGAGCCAGGGATAGGTAGTCCTGAGTTCAGGAAGCGTGTTGGGTTCAGCCTGTCCATGCCCTCGTCCAATCTCTCCATCTACATCAACAACACCCAGGAGTCAGACTCGGGACGATACCTCTGCAATGTCATCATCCCTGGAGCCGCCGGACTCTCTGGAGAAATGCGCCTCAATGTCAAAGtcccTCCCTCGCCTCCAGTGTGCACGATGACTGGGTCATCTGTGCTGAATGGCAATGTGACACTAAGCTGTAAGTCCAGTTTGGGCGAACCCATCCCTCATTACAAATGGACCAAGAATGCCCCCATGTCAGAGGTCTTCTTTTCCCCCATGCAGAATGAGAGGCAAGGTACCCTAAGGTTGAGTAACCTCACTAAGAGCATGTCAGGGAAATATGTGTGCCGAGCTAGCAACACTGCCGGTTCTGACACTTGCTCTGTCAACCTGGAGGTCTTCACCTCCTCTAATTCTGGAGtgattgctgctgctactctgggGTCCATCGTGGGACTGGTAGCCATCATACTCTTCCTCATCTTCATGCTGAGGAGGAGAGACCACGAAGAGGAGATAGCCAATGATATCAAGGAGGATGCCCAGGCACCCAAGCGTGTTTCCTGGGCAAAGAGTGGCACAGGCTCAGACATCATCTCCAAAAATGGCACGCTGTCATCCATAGCCACAAGCCCCCATCCGGGAGACCCCCAGCAGCTCAAAAACTTCCCCTACCCCACTGCACCGGCCTCTGACACGGGCTCTGTGCTCAACGCCTACCGCCTTCGGCCTGGAGAGCTCAACCCCCTGCAGGGCCTCCCAGGGTACATCAGTGGCACACTTCCACCCAGGCACACCAGACCCCTCTGTGTTGCTAACAACATTGATGCCACCTATCCACAAGGGCACAGTCGTTCTAATCACATCAGTGGGACTCCACCCCCTGGCCACACCCGGCTCCTCAGCACTAGTATCATTGTTGACACTCCTCCCCATGGGTTCAGTCAACCAcccagttttaaccatgttgGTGTCACCTCTCCACATGGGTACAGCAGACCCCATAGTTCTAACAACATTGGTGCCCCCTCCCCCCAGGGGCACAGTCAACCCCCAAGTTCTAACAATATCGGCGCCCTCTCTCCACATGGGCACAGCAGACCACCAAGCTTGAACCACATCAGTGGCAGCTCTCCACACAGGCACAGCCGACCCCCCAGCATCAGTAGCATGCCTCACTATGGACACAGCAGATCCTCCAGTTCTAACGGTGCCCCACCTGGATCCCATTCCCCACCTGGCCACATGGTCACAGACCCCGACAAGACTGAGGGGGCCCAGCCCAAGGTACCACGCCCTCTCACCTCGCCCATCAGCTCCACCACCCTGGCCCGTATGGGGGCTGTGCCCGTCATGGTGCCCGCTCAGAGCCAGGCTGGATCACTGGTATAGCCCACTGGAGGGTCTCCCGTTTTACTACTGAACACAAACGGATAAAGACTTCCTCAAAGGAAGATTGCATAGAGTAGAGAAGGATTTGCTTGGAATTAAAAACACTTTTTTATTGTGATTGTTCAAAATGATGTTCGGAGTAGAAAGAAGAGCTGAAGAAGACACTTGTGGAATCTCCTGTATTCAAGTCTGCACAAGTTCAAAGACTTAATtgatttgtttttattattttagctgttttcaaatattttttgctaaataaatgtttttgctTTTA
>XM_021588083.2
GGCGGGGCTTGTCATGTGCGCAAAGGTGCAGGCGGGTAGTTGGCAGATTGTAACCGTTCACTTCgaggacgaggagaggagaggagaggagagagctgtcTACATTTCAACTCTGGGAGCGAGGGGACGCCAGCACAAATATCCGAGCGGAGGACAGCCCATCGAACAGGAGACGAACTTCAAAAAGACAACTGACGCCTACTCCCAAATTCGCTGTTCGTCCTGTGGCTCGCACCGGGCACGTGCGTTTAATGTTGGGTGATGGCGATATCAGGGAGAGTCCGAGCGCTCCTGTCATTGTTATGGGTTTTTCAAGGTGACTCCCAGCGGGTGGAGATGCCCAGGAGAGAGATCGAGGTGGTGAAGGGTCAGATGGTAGTCCTACAGGCCTGGTACAGCCCCACATCTGATATTGGTAGGAACAGCGTCATCTGGAACTTCATGGCAAATGACTCCAAGCAGgtCATCTCCTACAGTAACGGTGAGCCAGGGATAGGTAGTCCTGAGTTCAGGAAGCGTGTTGGGTTCAGCCTGTCCATGCCCTCGTCCAATCTCTCCATCTACATCAACAACACCCAGGAGTCAGACTCGGGACGATACCTCTGCAATGTCATCATCCCTGGAGCCGCCGGACTCTCTGGAGAAATGCGCCTCAATGTCAAAGtcccTCCCTCGCCTCCAGTGTGCACGATGACTGGGTCATCTGTGCTGAATGGCAATGTGACACTAAGCTGTAAGTCCAGTTTGGGCGAACCCATCCCTCATTACAAATGGACCAAGAATGCCCCCATGTCAGAGGTCTTCTTTTCCCCCATGCAGAATGAGAGGCAAGGTACCCTAAGGTTGAGTAACCTCACTAAGAGCATGTCAGGGAAATATGTGTGCCGAGCTAGCAACACTGCCGGTTCTGACACTTGCTCTGTCAACCTGGAGGTCTTCACCTCCTCTAATTCTGGAGtgattgctgctgctactctgggGTCCATCGTGGGACTGGTAGCCATCATACTCTTCCTCATCTTCATGCTGAGGAGGAGAGACCACGAAGAGGAGATAGCCAATGATATCAAGGAGGATGCCCAGGCACCCAAGCGTGTTTCCTGGGCAAAGAGTGGCACAGGCTCAGACATCATCTCCAAAAATGGCACGCTGTCATCCATAGCCACAAGCCCCCATCCGGGAGACCCCCAGCAGCTCAAAAACTTCCCCTACCCCACTGCACCGGCCTCTGACACGGGCTCTGTGCTCAACGCCTACCGCCTTCGGCCTGGAGAGCTCAACCCCCTGCAGGGCCTCCCAGGGTACATCAGTGGCACACTTCCACCCAGGCACACCAGACCCCTCTGTGTTGCTAACAACATTGATGCCACCTATCCACAAGGGCACAGTCGTTCTAATCACATCAGTGGGACTCCACCCCCTGGCCACACCCGGCTCCTCAGCACTAGTATCATTGTTGACACTCCTCCCCATGGGTTCAGTCAACCAcccagttttaaccatgttgGTGTCACCTCTCCACATGGGTACAGCAGACCCCATAGTTCTAACAACATTGGTGCCCCCTCCCCCCAGGGGCACAGTCAACCCCCAAGTTCTAACAATATCGGCGCCCTCTCTCCACATGGGCACAGCAGACCACCAAGCTTGAACCACATCAGTGGCAGCTCTCCACACAGGCACAGCCGACCCCCCAGCATCAGTAGCATGCCTCACTATGGACACAGCAGATCCTCCAGTTCTAACGGTGCCCCACCTGGATCCCATTCCCCACCTGGCCACATGGTCACAGACCCCGACAAGACTGAGGGGGCCCAGCCCAAGGTACCACGCCCTCTCACCTCGCCCATCAGCTCCACCACCCTGGCCCGTATGGGGGCTGTGCCCGTCATGGTGCCCGCTCAGAGCCAGGCTGGATCACTGGTATAGCCCACTGGAGGGTCTCCCGTTTTACTACTGAACACAAACGGATAAAGACTTCCTCAAAGGAAGATTGCATAGAGTAGAGAAGGATTTGCTTGGAATTAAAAACACTTTTTTATTGTGATTGTTCAAAATGATGTTCGGAGTAGAAAGAAGAGCTGAAGAAGACACTTGTGGAATCTCCTGTATTCAAGTCTGCACAAGTTCAAAGACTTAATtgatttgtttttattattttagctgttttcaaatattttttgctaaataaatgtttttgctTTTA
>XM_036964914.1
GGGGCGGGGCTTGTCATGTGCGCAAAGGTGCAGGCGGGTAGTTGGCAGATTGTAACCGTTCACTTCgaggacgaggagaggagaggagaggagagagctgtcTACATTTCAACTCTGGGAGCGAGGGGACGCCAGCACAAATGTGACTCCCAGCGGGTGGAGATGCCCAGGAGAGAGATCGAGGTGGTGAAGGGTCAGATGGTAGTCCTACAGGCCTGGTACAGCCCCACATCTGATATTGGTAGGAACAGCGTCATCTGGAACTTCATGGCAAATGACTCCAAGCAGgtCATCTCCTACAGTAACGGTGAGCCAGGGATAGGTAGTCCTGAGTTCAGGAAGCGTGTTGGGTTCAGCCTGTCCATGCCCTCGTCCAATCTCTCCATCTACATCAACAACACCCAGGAGTCAGACTCGGGACGATACCTCTGCAATGTCATCATCCCTGGAGCCGCCGGACTCTCTGGAGAAATGCGCCTCAATGTCAAAGtcccTCCCTCGCCTCCAGTGTGCACGATGACTGGGTCATCTGTGCTGAATGGCAATGTGACACTAAGCTGTAAGTCCAGTTTGGGCGAACCCATCCCTCATTACAAATGGACCAAGAATGCCCCCATGTCAGAGGTCTTCTTTTCCCCCATGCAGAATGAGAGGCAAGGTACCCTAAGGTTGAGTAACCTCACTAAGAGCATGTCAGGGAAATATGTGTGCCGAGCTAGCAACACTGCCGGTTCTGACACTTGCTCTGTCAACCTGGAGGTCTTCACCTCCTCTAATTCTGGAGtgattgctgctgctactctgggGTCCATCGTGGGACTGGTAGCCATCATACTCTTCCTCATCTTCATGCTGAGGAGGAGAGACCACGAAGAGGAGATAGCCAATGATATCAAGGAGGATGCCCAGGCACCCAAGCGTGTTTCCTGGGCAAAGAGTGGCACAGGCTCAGACATCATCTCCAAAAATGGCACGCTGTCATCCATAGCCACAAGCCCCCATCCGGGAGACCCCCAGCAGCTCAAAAACTTCCCCTACCCCACTGCACCGGCCTCTGACACGGGCTCTGTGCTCAACGCCTACCGCCTTCGGCCTGGAGAGCTCAACCCCCTGCAGGGCCTCCCAGGGTACATCAGTGGCACACTTCCACCCAGGCACACCAGACCCCTCTGTGTTGCTAACAACATTGATGCCACCTATCCACAAGGGCACAGTCGTTCTAATCACATCAGTGGGACTCCACCCCCTGGCCACACCCGGCTCCTCAGCACTAGTATCATTGTTGACACTCCTCCCCATGGGTTCAGTCAACCAcccagttttaaccatgttgGTGTCACCTCTCCACATGGGTACAGCAGACCCCATAGTTCTAACAACATTGGTGCCCCCTCCCCCCAGGGGCACAGTCAACCCCCAAGTTCTAACAATATCGGCGCCCTCTCTCCACATGGGCACAGCAGACCACCAAGCTTGAACCACATCAGTGGCAGCTCTCCACACAGGCACAGCCGACCCCCCAGCATCAGTAGCATGCCTCACTATGGACACAGCAGATCCTCCAGTTCTAACGGTGCCCCACCTGGATCCCATTCCCCACCTGGCCACATGGTCACAGACCCCGACAAGACTGAGGGGGCCCAGCCCAAGGTACCACGCCCTCTCACCTCGCCCATCAGCTCCACCACCCTGGCCCGTATGGGGGCTGTGCCCGTCATGGTGCCCGCTCAGAGCCAGGCTGGATCACTGGTATAGCCCACTGGAGGGTCTCCCGTTTTACTACTGAACACAAACGGATAAAGACTTCCTCAAAGGAAGATTGCATAGAGTAGAGAAGGATTTGCTTGGAATTAAAAACACTTTTTTATTGTGATTGTTCAAAATGATGTTCGGAGTAGAAAGAAGAGCTGAAGAAGACACTTGTGGAATCTCCTGTATTCAAGTCTGCACAAGTTCAAAGACTTAATtgatttgtttttattattttagctgttttcaaatattttttgctaaataaatgtttttgctTTTA
>XM_036964915.1
tgatcaaACGGAAAAATGGTCTCGTTTTCATCCCACacagcatgtcagatttctaaTGTTTAGGTGTAGGCTAGGctagtcccattagttttctttgtagcctcgtttgaatgttgcggttgttcacatttgtacggaatgggGTGACTCCCAGCGGGTGGAGATGCCCAGGAGAGAGATCGAGGTGGTGAAGGGTCAGATGGTAGTCCTACAGGCCTGGTACAGCCCCACATCTGATATTGGTAGGAACAGCGTCATCTGGAACTTCATGGCAAATGACTCCAAGCAGgtCATCTCCTACAGTAACGGTGAGCCAGGGATAGGTAGTCCTGAGTTCAGGAAGCGTGTTGGGTTCAGCCTGTCCATGCCCTCGTCCAATCTCTCCATCTACATCAACAACACCCAGGAGTCAGACTCGGGACGATACCTCTGCAATGTCATCATCCCTGGAGCCGCCGGACTCTCTGGAGAAATGCGCCTCAATGTCAAAGtcccTCCCTCGCCTCCAGTGTGCACGATGACTGGGTCATCTGTGCTGAATGGCAATGTGACACTAAGCTGTAAGTCCAGTTTGGGCGAACCCATCCCTCATTACAAATGGACCAAGAATGCCCCCATGTCAGAGGTCTTCTTTTCCCCCATGCAGAATGAGAGGCAAGGTACCCTAAGGTTGAGTAACCTCACTAAGAGCATGTCAGGGAAATATGTGTGCCGAGCTAGCAACACTGCCGGTTCTGACACTTGCTCTGTCAACCTGGAGGTCTTCACCTCCTCTAATTCTGGAGtgattgctgctgctactctgggGTCCATCGTGGGACTGGTAGCCATCATACTCTTCCTCATCTTCATGCTGAGGAGGAGAGACCACGAAGAGGAGATAGCCAATGATATCAAGGAGGATGCCCAGGCACCCAAGCGTGTTTCCTGGGCAAAGAGTGGCACAGGCTCAGACATCATCTCCAAAAATGGCACGCTGTCATCCATAGCCACAAGCCCCCATCCGGGAGACCCCCAGCAGCTCAAAAACTTCCCCTACCCCACTGCACCGGCCTCTGACACGGGCTCTGTGCTCAACGCCTACCGCCTTCGGCCTGGAGAGCTCAACCCCCTGCAGGGCCTCCCAGGGTACATCAGTGGCACACTTCCACCCAGGCACACCAGACCCCTCTGTGTTGCTAACAACATTGATGCCACCTATCCACAAGGGCACAGTCGTTCTAATCACATCAGTGGGACTCCACCCCCTGGCCACACCCGGCTCCTCAGCACTAGTATCATTGTTGACACTCCTCCCCATGGGTTCAGTCAACCAcccagttttaaccatgttgGTGTCACCTCTCCACATGGGTACAGCAGACCCCATAGTTCTAACAACATTGGTGCCCCCTCCCCCCAGGGGCACAGTCAACCCCCAAGTTCTAACAATATCGGCGCCCTCTCTCCACATGGGCACAGCAGACCACCAAGCTTGAACCACATCAGTGGCAGCTCTCCACACAGGCACAGCCGACCCCCCAGCATCAGTAGCATGCCTCACTATGGACACAGCAGATCCTCCAGTTCTAACGGTGCCCCACCTGGATCCCATTCCCCACCTGGCCACATGGTCACAGACCCCGACAAGACTGAGGGGGCCCAGCCCAAGGTACCACGCCCTCTCACCTCGCCCATCAGCTCCACCACCCTGGCCCGTATGGGGGCTGTGCCCGTCATGGTGCCCGCTCAGAGCCAGGCTGGATCACTGGTATAGCCCACTGGAGGGTCTCCCGTTTTACTACTGAACACAAACGGATAAAGACTTCCTCAAAGGAAGATTGCATAGAGTAGAGAAGGATTTGCTTGGAATTAAAAACACTTTTTTATTGTGATTGTTCAAAATGATGTTCGGAGTAGAAAGAAGAGCTGAAGAAGACACTTGTGGAATCTCCTGTATTCAAGTCTGCACAAGTTCAAAGACTTAATtgatttgtttttattattttagctgttttcaaatattttttgctaaataaatgtttttgctTTTA

Function

NR:

description
endothelial cell-selective adhesion molecule-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588085.2 False 2226 mRNA 0.53 7 23330022 23361504
XM_021588083.2 False 2206 mRNA 0.53 8 23330022 23408044
XM_036964914.1 False 2032 mRNA 0.53 7 23330022 23408046
XM_036964915.1 True 2033 mRNA 0.52 7 23330022 23409999

Neighbor

gene id symbol gene type direction distance location
LOC110507816 NA coding downstream 10872 23318732 ~ 23319150 (-)
thyn1 thyn1 coding downstream 12097 23315142 ~ 23317925 (-)
igsf9ba LOC106613021 coding downstream 53524 23202397 ~ 23276498 (-)
arhgap32a LOC106581150 coding downstream 132656 23163866 ~ 23197366 (-)
ncam1b LOC106581152 coding downstream 411532 22810667 ~ 22918490 (-)
hspa8b hsp7c coding upstream 93310 23503309 ~ 23513406 (-)
sytl2b LOC106581144 coding upstream 114664 23524663 ~ 23546366 (-)
picalmb LOC106581143 coding upstream 137574 23547573 ~ 23569211 (-)
trnap-agg-156 NA coding upstream 297438 23707437 ~ 23707508 (-)
LOC110507812 LOC106581137 coding upstream 327155 23737154 ~ 23741339 (-)
G2065128 NA non-coding downstream 130159 23199381 ~ 23199863 (-)
G2065112 NA non-coding downstream 167517 23162221 ~ 23162505 (-)
G2065073 NA non-coding downstream 227413 23097617 ~ 23102609 (-)
G2065069 NA non-coding downstream 237590 23092230 ~ 23092432 (-)
G2065241 NA non-coding upstream 5111 23415110 ~ 23415476 (-)
G2065311 NA non-coding upstream 91922 23501921 ~ 23502844 (-)
G2065422 NA non-coding upstream 282594 23692593 ~ 23696166 (-)
G2066101 NA non-coding upstream 359144 23769143 ~ 23771981 (-)
zbtb16b LOC106581153 other downstream 521916 22780311 ~ 22808183 (-)
LOC110507789 LOC106581159 other downstream 611916 22712654 ~ 22718153 (-)
LOC110507126 kiaa0100 other downstream 2025894 21295518 ~ 21311437 (-)
LOC110507765 dynll2a other downstream 2057221 21270167 ~ 21273576 (-)
LOC110507754 LOC106581192 other downstream 2407647 20913520 ~ 20924130 (-)
G2065425 NA other upstream 293164 23703163 ~ 23705965 (-)
G2066096 LOC106581136 other upstream 353700 23763699 ~ 23765479 (-)
G2066126 LOC106581133 other upstream 397739 23807738 ~ 23808909 (-)
pcp4b NA other upstream 726178 24136177 ~ 24181998 (-)
G2068043 NA other upstream 2408640 25818639 ~ 25834101 (-)

Expression


Co-expression Network