LOC118944716


Basic Information

Item Value
gene id LOC118944716
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 23810397 ~ 23813666 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040008.1
tttcagccctttcctgggtagcttatcagagtggaaaagaacaaacaaaacaagagaaaaatatacattcagcagtccattaatcagttggtgtgtgtgtgtgtgtgtcccagctgTCTTATCTCCTCCTACCCCACTGCTCCCAGTGAGTGTCTCGCCTTCTACTGCCCAGCAACCAGCAGGTAGTTCCTACTCAGGTACATCTTCATCTGCTTAGCTGCCATTCTCCCTATATAGCCTTTTGGAGTGGTCCTGTTTACAGATATGTTAGTATCTTCAGACATAATATAGCAGAAATGATTACAGTTACATGGAATGTGTTTGTTATGTCTGCTATGCTCGTCCTCTTCGGAGCCCTCTGTGCTGCAACAGATGAGTTCACGCTTCCTGGCCTTCCAGGTTTCTGGCCAGACCATCCTCTACCTGTCCACTGAGGTCCACGAACACCAACATCAGCACACAGAAATGTACAGAGAAGTTAAATTAAAGCTGCTCTTTAATTGTTTGTTATTCTTCTTACTTTAatgtattttcttaactgcattgttggttaagggcttgtaagtaggcatttcactaaggtctacctacacctgttgtgttcggcgcatgtgacaaataacatttgatttgaagtactactgttttatatcaattatgTTGATGAAGCCTGTACAAATCTAAtgaatgttatttttattttgtcaaaTTCTCAACTAATGTGGATCCCTTCTACAGACACAATGTAAGTCTCTCTCATATACTGCTTTTCTATACTCTATAGCTGACCCATCCACATGTGATGCCAGGGTTGGCCCCCATGGCACCCAGGACCCTTCTGCTCCCTGCAGGGGGCCTTCCAGCCTTCCAAGGTACCAGTGGAAAAGAGAGTAATGGGAACTAGGAAGTTGGGACAGAGGCAAAATATATAGTATTTAGATATCATCAAGTTATGGTGTCATGAGTTAGTAGTGTGTGATCAGAAGTCTACATTTCCTTGTCTTTGTCAGACATCAAATGTTCTAGACATGGCACCAGGACCTAGGACTAGGTCTGGGTCACACAAACACCTACTTGTGTGAGAAGAATCCCAAGAGTACCCTTTAGATCATTTTAATTTGTATCGCCAAAATGTTCTCATTTGAAAAGTGTTTTGAGTTCTGTTTCTATTTCGACCTACTGAACTGGATATTCTCTCAGAGACCAGGAAGATGGCATACAATGCATGTCCGCAATGCTTAGCAGATCCACCACCATAAACTGCGGGTGAAGGTATGAAAATGTATTGAACATCCACTAAAATGTGTATAAAATCCCAAAATTATGATTTGTATCGAAGCCACACATAACTGGcactatatgtctgtctgtcctcccatTTCTCAGCAGAAAATGCAAGTGGACTCACAAGCAATCAACTTCGGTATCAAGCCGGAGTTTCTGACTCAGCCTGCTGGTCCTGACCTGATTCAAGCCATCCACCGTCAACGGGACCTTATTTAGTCCTCCACCCCATTCTCTAACCAAGTCACACAGTACACATCCTTCATTTGGAGTTTTGGGGACAATGAGTGCCACAGCCTTTGGTGGAATGGCAATCCTAGCACTAAGTGAGTAGCACATTCAGTCTCCCTTCAGCATTGGTTCAGTATTATGACAATATAATCATAAAGGAGGGAATTGCCTTTTGAAACTCACATTTCTTTGACTTGCTTATTCTTCCTCTTCTTAAAAACAGATGATGATCCCATGATCTATCAAAGACAATCTAAATGCACCAAATGGAGAAGTAGGACGAACTCCTGAGTGGTGGAGCAGGCAGCAGAAGACACCCCTGTCCTCTGAATGACAACCTGAACGATTCAAGCAGGAAACCTCAGGACAGGGAATGGGGAAAGCAGCTGCACCTACCCAGAGAGAAGATCGAGGAGAAACAGTACATAGTGGAGAAACATCAAGGCCACAATGTTGCAGGGACTCTTGACATTTCACGGGGCTAAAGAGAAGTCTGTTCCTCAGACAATGACCTTGAAACCTGATCAGCGGTCCAATGGCAGACGTAGCTGGGAGTCAGGAAGAGAGGGCTTGAGTGTGAAAACCACATAAAGGCCAAGAAGATGAAGCGGCAGAGAGGATGACCAGGATTTCAATGATGGCCCTCAAACCCAGAACCCCACAGAGAAACCATCTCTGACCCCTCCAATACACACTCCATCCTCCATGTTGATGCAGCACATGACCATAGGAAACATTATTCCAGTACTCTACCCAGTAAATAGCTTATGTAAACTGGCCCGGACTCATGTTGGCACTCCTGTTATTCAGCTCATCCCCTACTCAGGAGCTGAGAGGTACCCTTACCCTGCACTTCCCTGGGACCCCCCCTAAGAGACCCACTATGGGATGTATACAGAGGTATGGACCTCCCCGTCTCCTCCCGTCAAGAGCTGAGCATGAGGGCTGATCCTCCACGTGGTGTAGTGGGGGCCAGGCTGTTGAAGGCAGCAGACTGGTCATACAGAGACACTCATCACGGCTTTCCGCACCCACCCCATCACCCCTCACTGGCCCTGAAGCAGCAGGAGAGGGCTTACCTCATGGAGAGAGCGTCTGACTATGCTCAGAGAGGAATACTACCAGCACAGCCTCCGTTCTGCCACCATGGGAGGCCATCTCCCCCATCCCAGCCTCCTGACCTCCACCTATTCCACGTGACACATATTTCCATGGTGGGTCTCACACAGAGCCCCCAGAGTAGCCTCCCCAACAGAACTCTTCCCCCTGGGTCCTTAAGCACACTGGTGCCTCtggtccccttctctctcccattgTCTGGCGCGTCCCACAGGACTACCTCGTAATGACAGAAATCAGAAGACGCTATTCTGTGAGCTTGCTTGCCTTAGAACTGTAACTCTGCAAGGTACTGCTTCAAGACAAATTCTGTGATTCTGATTATTACCTGTATGACACAGATATAGGACAAACTACTGTGTTGAAAAACGATTTTACATCCCTTAAAACACCTGTAAATTGATGAACAATGATTTTGTTCAACATAAAAGTGCAAATTCGTTCATAAAATGTTAACTCATGAGTTAGTCTGGTTACTGTTCCTAAAATGGACATACAAAAATATAACTGACAAAa

Function

NR:

description
PREDICTED: autism susceptibility gene 2 protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040008.1 True 3150 mRNA 0.45 2 23810397 23813666

Neighbor

gene id symbol gene type direction distance location
LOC118944644 NA coding downstream 23207 23777989 ~ 23787190 (-)
LOC110507139 LOC106581136 coding downstream 32435 23761486 ~ 23777962 (-)
LOC110507812 LOC106581137 coding downstream 69058 23737154 ~ 23741339 (-)
trnap-agg-156 NA coding downstream 102889 23707437 ~ 23707508 (-)
picalmb LOC106581143 coding downstream 241186 23547573 ~ 23569211 (-)
LOC110507820 LOC106581132 coding upstream 23616 23837282 ~ 23869548 (-)
LOC110507821 LOC106581130 coding upstream 61669 23875335 ~ 23885622 (-)
vmp1 tmm49 coding upstream 76612 23890278 ~ 23907734 (-)
LOC110507825 LOC106612995 coding upstream 137127 23950793 ~ 23962065 (-)
LOC110507827 LOC106581128 coding upstream 158335 23972001 ~ 23982325 (-)
G2066101 NA non-coding downstream 38416 23769143 ~ 23771981 (-)
G2065422 NA non-coding downstream 114231 23692593 ~ 23696166 (-)
sytl2b LOC106581144 non-coding downstream 264612 23524663 ~ 23546366 (-)
G2065311 NA non-coding downstream 307553 23501921 ~ 23502844 (-)
G2065241 NA non-coding downstream 394921 23415110 ~ 23415476 (-)
G2066157 NA non-coding upstream 96333 23909999 ~ 23910208 (-)
G2066175 NA non-coding upstream 123174 23936840 ~ 23938765 (-)
G2066171 NA non-coding upstream 129846 23943512 ~ 23943865 (-)
G2066336 NA non-coding upstream 365566 24179232 ~ 24179834 (-)
G2066383 NA non-coding upstream 433396 24247062 ~ 24247264 (-)
G2066126 LOC106581133 other downstream 1488 23807738 ~ 23808909 (-)
G2066096 LOC106581136 other downstream 44918 23763699 ~ 23765479 (-)
G2065425 NA other downstream 104432 23703163 ~ 23705965 (-)
zbtb16b LOC106581153 other downstream 1002291 22780311 ~ 22808183 (-)
LOC110507789 LOC106581159 other downstream 1092291 22712654 ~ 22718153 (-)
pcp4b NA other upstream 322511 24136177 ~ 24181998 (-)
G2068043 NA other upstream 2004973 25818639 ~ 25834101 (-)
G2068676 NA other upstream 2511464 26325130 ~ 26325479 (-)
LOC110507885 LOC106581250 other upstream 3536307 27333102 ~ 27404380 (-)
LOC110507886 LOC106581251 other upstream 3616506 27428483 ~ 27447544 (-)

Expression


Co-expression Network