Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110507889 |
| gene name | LOC106581258 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 27517351 ~ 27534236 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| vascular endothelial zinc finger 1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021588288.2 | False | 4652 | mRNA | 0.46 | 6 | 27517351 | 27534232 |
| XM_021588283.2 | False | 4767 | mRNA | 0.46 | 8 | 27517351 | 27534233 |
| XM_021588289.2 | False | 4596 | mRNA | 0.46 | 5 | 27517351 | 27534236 |
| XM_036965384.1 | False | 4872 | mRNA | 0.47 | 9 | 27517351 | 27534236 |
| XM_036965385.1 | False | 4812 | mRNA | 0.46 | 8 | 27517351 | 27534236 |
| XM_036965386.1 | False | 4803 | mRNA | 0.47 | 8 | 27517351 | 27534236 |
| XM_036965387.1 | True | 4758 | mRNA | 0.47 | 7 | 27517351 | 27534236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507887 | LOC106581252 | coding | downstream | 17300 | 27448217 ~ 27500051 (-) |
| LOC110507886 | LOC106581251 | coding | downstream | 69807 | 27428483 ~ 27447544 (-) |
| LOC110507885 | LOC106581250 | coding | downstream | 112971 | 27333102 ~ 27404380 (-) |
| LOC100135795 | LOC100135795 | coding | downstream | 186886 | 27318991 ~ 27330465 (-) |
| LOC110507142 | NA | coding | downstream | 217421 | 27299111 ~ 27299930 (-) |
| LOC118944649 | LOC106581256 | coding | upstream | 168418 | 27702654 ~ 27738528 (-) |
| LOC118944710 | NA | coding | upstream | 216549 | 27750785 ~ 27751274 (-) |
| LOC118944701 | LOC106581256 | coding | upstream | 225466 | 27759702 ~ 27763326 (-) |
| LOC118944708 | LOC106581256 | coding | upstream | 239115 | 27773351 ~ 27774663 (-) |
| LOC118944699 | LOC106581256 | coding | upstream | 244568 | 27778804 ~ 27780466 (-) |
| G2069731 | NA | non-coding | downstream | 122357 | 27394424 ~ 27394994 (-) |
| G2069679 | NA | non-coding | downstream | 184320 | 27287692 ~ 27333031 (-) |
| G2069672 | NA | non-coding | downstream | 234235 | 27282799 ~ 27283116 (-) |
| G2069871 | NA | non-coding | upstream | 85304 | 27619540 ~ 27664128 (-) |
| G2069879 | LOC106581256 | non-coding | upstream | 108420 | 27642656 ~ 27665300 (-) |
| G2069894 | NA | non-coding | upstream | 135886 | 27670122 ~ 27670402 (-) |
| G2069910 | NA | non-coding | upstream | 136607 | 27670843 ~ 27671082 (-) |
| G2069913 | NA | non-coding | upstream | 140435 | 27674671 ~ 27674917 (-) |
| G2068676 | NA | other | downstream | 1191872 | 26325130 ~ 26325479 (-) |
| G2068043 | NA | other | downstream | 1683250 | 25818639 ~ 25834101 (-) |
| G2069842 | NA | other | upstream | 5764 | 27540000 ~ 27540609 (-) |
| LOC118944698 | LOC106581256 | other | upstream | 334988 | 27866010 ~ 27871529 (-) |
| LOC118944653 | LOC106581256 | other | upstream | 338473 | 27872709 ~ 27889358 (-) |
| G2070530 | NA | other | upstream | 636602 | 28170838 ~ 28172542 (-) |
| G2070744 | NA | other | upstream | 989710 | 28523946 ~ 28524550 (-) |
