LOC118944650


Basic Information

Item Value
gene id LOC118944650
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 27783271 ~ 27786414 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964654.1
tttttcttactaaagctaaatgagtttgaacttggagtggaggtaagattaggaattggaaactacttgtgcggagctcttagttcatgcggccatctcgtccaagggtcacgtgatccccGACAGTGCTATTTTAAGTGATTTTCAAGACACCCAAAGTCAATTTAAatccacaacaaaatctgcaggatAAAAAGCAATATAATCAAACATTCAAATAAGTAAACAGGCTATATTAAAGTGCACTAAACATAGAGACagattaaccatggagaacacgaaacatgatgacagattaaccagggaagtgaatttaacagaggTTAAAGCTAAAACAACAGAATCTGGGTACgtctgtgtgaagaggtgtggctttagtgtggatttgaatagtacacaagtaggcctacgctatttttgcactgtaaaactttttttttaagtgttatgtTTTCCCAGATTCATAGTGTTATGCAGCCCAGGCCTATCTAGGAAGGCTGGGCATAAATTGTTTGCTCACAGCATCACATGATGACGTGggcaacataaacacttaaactctgtagattaaagttaatagtaatcaaaactaatttcaccacGAAAGGAAGTGCAATCGAAATGAATGAAGAAGACAAGGTAATTCTAGTGAGTTAATAAAATGACAAGGTGTTGCCTGTCAGCGTTGTAGACTACTGCCTCACAAGCCCGGGCTTTAGTGGCACTGGCATACGCGCTTGCCTCTGCACTGAAGGAGCCACCGAACGCGTCCGCGTTGCAGCTCTCACTTTCTCccgctacagtatgtcctacaatGACATATTTGGTGGGGATTGGCAGCCAACAATAGGATTGGATTGGGACTAAATCAAAGAATAAAACGATATTGAAATGAATATTATTAACAAATATTTCCCAGAAGATTTTGGGTTCAACCTAAGGCTGACTAGGACAGATCAATCAACTTGATCCGACACAGTAAGCCTACATGTCATACgtagcacagagggaggatggtgatcctcagagggaaggaaaggaagttGTTGAGGAAGAACCGGTGGCCACGCCCAAAGAGGAGGCCAAGAAGGGAAGGAAGgcAAAAAGTAAGAGGAGTGGCAAGAAGTCAAGGAAGCTGGGCACTGACAACGATGCAGTCTCCAGGAATAAACACCTGGATAGAGGATCTGTAATTGAGCTCCTGGAGAAGAAAGCTGTTCAGGCTGCATTCGGCCCAGGCAACAAGGATGAGATGGAATACTCctacccaatcctcatctcattcctgcgcaatcttactgatgagcagtggcaagtgatctacaaaggactaaaaaaccctatgacgaaggaacagcttgccaaattgtgcaagacaattgtaaccttcatcgcacagaccaccctgcagatcctgctgccaGCCCTGGCCCGCGTACTTGGGGTAAAGGACTTTGCTGACGAcgacactgactcacccaagaGGGATGGCAGTGCAAGATCCTTTGCTGCCTTTGATCAGGAAAGActggagctcatccaggaagttaGATATCTGGCGAAGAAAATGTATAATGCTCAACATCTCAGGTCCCTAACACCCTCTTCTAAGAGGTATGTTCCCCTCAAGGTTTTCATGTATGGATTTCACCGAGATCATCTATCCCAGTGTTAG

Function

NR:

description
uncharacterized protein LOC110526909

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964654.1 True 1675 mRNA 0.44 6 27783271 27786414

Neighbor

gene id symbol gene type direction distance location
LOC118944699 LOC106581256 coding downstream 2805 27778804 ~ 27780466 (-)
LOC118944708 LOC106581256 coding downstream 8608 27773351 ~ 27774663 (-)
LOC118944701 LOC106581256 coding downstream 19945 27759702 ~ 27763326 (-)
LOC118944710 NA coding downstream 31997 27750785 ~ 27751274 (-)
LOC118944649 LOC106581256 coding downstream 44743 27702654 ~ 27738528 (-)
LOC118944697 LOC106581256 coding upstream 9851 27796265 ~ 27798599 (-)
LOC118944704 LOC106581256 coding upstream 25227 27811641 ~ 27813263 (-)
LOC118944706 NA coding upstream 29723 27816137 ~ 27823761 (-)
LOC118944705 LOC106581256 coding upstream 30699 27817113 ~ 27818709 (-)
LOC118944702 LOC106581256 coding upstream 50747 27837161 ~ 27839026 (-)
G2070339 NA non-coding downstream 39016 27743988 ~ 27744255 (-)
G2070338 NA non-coding downstream 40490 27742552 ~ 27742781 (-)
G2070332 NA non-coding downstream 59774 27722950 ~ 27723497 (-)
G2070331 NA non-coding downstream 60790 27722022 ~ 27722481 (-)
G2070330 NA non-coding downstream 61819 27720633 ~ 27721452 (-)
G2070353 NA non-coding upstream 46421 27832835 ~ 27833495 (-)
G2070354 NA non-coding upstream 47479 27833893 ~ 27921841 (-)
LOC118944700 LOC106581256 non-coding upstream 99078 27883413 ~ 27886802 (-)
G2070374 NA non-coding upstream 113643 27900057 ~ 27900680 (-)
G2070420 LOC107387520 non-coding upstream 208040 27994454 ~ 27994718 (-)
G2069842 NA other downstream 242662 27540000 ~ 27540609 (-)
LOC110507887 LOC106581252 other downstream 322623 27448217 ~ 27500051 (-)
LOC110507886 LOC106581251 other downstream 335773 27428483 ~ 27447544 (-)
LOC110507885 LOC106581250 other downstream 378893 27333102 ~ 27404380 (-)
G2068676 NA other downstream 1457792 26325130 ~ 26325479 (-)
LOC118944698 LOC106581256 other upstream 82810 27866010 ~ 27871529 (-)
LOC118944653 LOC106581256 other upstream 86295 27872709 ~ 27889358 (-)
G2070530 NA other upstream 384424 28170838 ~ 28172542 (-)
G2070744 NA other upstream 737532 28523946 ~ 28524550 (-)
G2071247 LOC106581281 other upstream 1154940 28941354 ~ 28942728 (-)

Expression


Co-expression Network