alp3 (LOC106580686)


Basic Information

Item Value
gene id alp3
gene name LOC106580686
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 29658317 ~ 29672478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965692.1
AATATATTATTCTGTTGCGCTGAGGGAAGATCAGAGAGAACAACTGTCCTCTTTAGACATCATCATGGAAACTCAGAAATGGTCTATCGTGGCCCTGTGTCTGCTGGGGGTTTTGGGTTCAACCACCGCCAAAGTTGAGGAGGAGAACCCAGAGTTCTGGAGAGCCCAGGGTGCCAAGGCTTTGCAAGCGGCGCTGAACAGGAAGTTGAACACCAATGTGGCCAAAAACATCATGCTCTTCCTGGGTGACGGTATGGGCATTACCACCATCACAGCAGCTCGAATCCTCAAGGGCCAGATGCACAACCAGTCTGGAGAGGAGACAGTGATGACCATGGATACTTTCCCCCATGCGGGCCTCCTCAAgaCATACAGTGTTGACTTCCAGATCCCTGACAGTTCATCCACAGCCACAGCCTACCTGTGTGGTGTTAAGACCAACCTGAACACGGTCGGTGTGAGCGCTGCCGCTCGCAACGGAATCTGCAAGACCCAGAAGGGCAACGAGGTCTCCTCTATTCTCAAGTGGGCCAAAGATGCTGGTAAATCGGTTGGCATCGTCACAACAACGCGGGTCCAGCATGCAACTCCTGCCACAACCTATGCCCACAGTGCCAGCAGGAAGTGGTACAGCGATGCAGACATGCCCGCCTCTGCCAAGAAAGAAGGATGCACAGACATTGCCTCTCAGCTCCTAAAAAACACTGACATTGATGTGATCATCGGCGGGGGGAGGAAGTACATGACCCCTAAGGGCACCTGGGACCCAGAGTACCCCCGAGACCTGGCCTCCAGTGGCAAGAGACAGGACGGACGCCACCTCATCTCTGACTGGCAGAAGATGAAAGTCGGAAAggtggCTCGTTACGTGTGGAACAGGACTGACTTTGACGCTGTGGACCCTGACACCACTGACTACCTTATGGCCCTGTTTGAGCCTGGAGACCTGCGCTTTGATGTGGAGAGAGACCCCACCATGGACCCTTCCATCGCTGAGACCACAGAAAAGGCCATCCGCATCCTCAGCAAAAACCCCAAGGGATTCTTCCTCCTGGTAGAAGgtggACGTATCGACCAGGGCCACCATGCCAGCAGAGCCTCCATGGCGTTGCACGAGACGGTTGCCTTTGACAATGCTGTCGCCAAGGGCCTGGAGCTGACCAATGAGGAGGAGACTCTCACCCTGGTGACAGCTGACCACTCCCACGCCTTCACCTTCAATGGATACCCCTTTAGAGGGCAAAGCATTCTGGGGAAATCTCCTCTGTATGGGAAGGATATGCTGCCTTACACAACCCTGATGTACGGAAACGGCCCTGGATACAAAGTCGTAGACAACAAGCGCCCTGACATCGGTAAAGTGGATACACAGTCGAAGGACTACGTGCAGCTGTCTGCGGTGCCCCTGGACACTGAGACCCATGGTGGGGAAGATGTGGCAGTGCTGGCCCGCGGCCCCATGGCCCACCTCTTCCACGGGGTCCAGGAGCAGAGTTACCTGGCCCATGCCATGGCCTATGCTGGCTGTGTGGGACGGGACCTCAGGCACTGTGAAAGTAGACCTCAACACACCAATACCAAGAGGATCCTCGTCAGTGCTACTGAGGATGATAGGAACAGTGCACCATCCCAGgtatcctccatctctctggtTACTGCCCTACTGGCTGCCGTGCTGCACTGAGAGACtggtggaggtggagaagagggagggacagaaagagagaatgaaagaggtcCATTTGTTTTGCTACTCCTCTTCAACAAAAAAGTGCTCTGTGCCAAAATGATTTtgtcaaattatgtaaattatgaCAATACTCCTGATTTGTATATGTTTATATTTAAATAAATCATATATTTGTCGCTAATAAAAAAGTATATGGACTAGAAGATGA
>XM_036965693.1
AATATATTATTCTGTTGCGCTGAGGGAAGATCAGAGAGAACAACTGTCCTCTTTAGACATCATCATGGAAACTCAGAAATGGTCTATCGTGGCCCTGTGTCTGCTGGGGGTTTTGGGTTCAACCACCGCCAAAGTTGAGGAGGAGAACCCAGAGTTCTGGAGAGCCCAGGGTGCCAAGGCTTTGCAAGCGGCGCTGAACAGGAAGTTGAACACCAATGTGGCCAAAAACATCATGCTCTTCCTGGGTGACGGTATGGGCATTACCACCATCACAGCAGCTCGAATCCTCAAGGGCCAGATGCACAACCAGTCTGGAGAGGAGACAGTGATGACCATGGATACTTTCCCCCATGCGGGCCTCCTCAAgaCATACAGTGTTGACTTCCAGATCCCTGACAGTTCATCCACAGCCACAGCCTACCTGTGTGGTGTTAAGACCAACCTGAACACGGTCGGTGTGAGCGCTGCCGCTCGCAACGGAATCTGCAAGACCCAGAAGGGCAACGAGGTCTCCTCTATTCTCAAGTGGGCCAAAGATGCTGGTAAATCGGTTGGCATCGTCACAACAACGCGGGTCCAGCATGCAACTCCTGCCACAACCTATGCCCACAGTGCCAGCAGGAAGTGGTACAGCGATGCAGACATGCCCGCCTCTGCCAAGAAAGAAGGATGCACAGACATTGCCTCTCAGCTCCTAAAAAACACTGACATTGATGTGATCATCGGCGGGGGGAGGAAGTACATGACCCCTAAGGGCACCTGGGACCCAGAGTACCCCCGAGACCTGGCCTCCAGTGGCAAGAGACAGGACGGACGCCACCTCATCTCTGACTGGCAGAAGATGAAAGTCGGAAAggtggCTCGTTACGTGTGGAACAGGACTGACTTTGACGCTGTGGACCCTGACACCACTGACTACCTTATGGCCCTGTTTGAGCCTGGAGACCTGCGCTTTGATGTGGAGAGAGACCCCACCATGGACCCTTCCATCGCTGAGACCACAGAAAAGGCCATCCGCATCCTCAGCAAAAACCCCAAGGGATTCTTCCTCCTGGTAGAAGgtggACGTATCGACCAGGGCCACCATGCCAGCAGAGCCTCCATGGCGTTGCACGAGACGGTTGCCTTTGACAATGCTGTCGCCAAGGGCCTGGAGCTGACCAATGAGGAGGAGACTCTCACCCTGGTGACAGCTGACCACTCCCACGCCTTCACCTTCAATGGATACCCCTTTAGAGGGCAAAGCATTCTGGGGAAATCTCCTCTGTATGGGAAGGATATGCTGCCTTACACAACCCTGATGTACGGAAACGGCCCTGGATACAAAGTCGTAGACAACAAGCGCCCTGACATCGAGTCGAAGGACTACGTGCAGCTGTCTGCGGTGCCCCTGGACACTGAGACCCATGGTGGGGAAGATGTGGCAGTGCTGGCCCGCGGCCCCATGGCCCACCTCTTCCACGGGGTCCAGGAGCAGAGTTACCTGGCCCATGCCATGGCCTATGCTGGCTGTGTGGGACGGGACCTCAGGCACTGTGAAAGTAGACCTCAACACACCAATACCAAGAGGATCCTCGTCAGTGCTACTGAGGATGATAGGAACAGTGCACCATCCCAGgtatcctccatctctctggtTACTGCCCTACTGGCTGCCGTGCTGCACTGAGAGACtggtggaggtggagaagagggagggacagaaagagagaatgaaagaggtcCATTTGTTTTGCTACTCCTCTTCAACAAAAAAGTGCTCTGTGCCAAAATGATTTtgtcaaattatgtaaattatgaCAATACTCCTGATTTGTATATGTTTATATTTAAATAAATCATATATTTGTCGCTAATAAAAAAGTATATGGACTAGAAGATGA

Function

NR:

description
PREDICTED: alkaline phosphatase, placental-like, partial

GO: NA

KEGG:

id description
K01077 E3.1.3.1, phoA, phoB; alkaline phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965692.1 False 1898 mRNA 0.53 11 29658317 29672478
XM_036965693.1 True 1883 mRNA 0.53 11 29658317 29672478

Neighbor

gene id symbol gene type direction distance location
zgc:165508 LOC106613118 coding downstream 6828 29626155 ~ 29651489 (-)
LOC110507265 NA coding downstream 372904 29277995 ~ 29285413 (-)
LOC110507151 LOC106581293 coding downstream 406772 29217865 ~ 29251545 (-)
LOC110507150 LOC106581286 coding downstream 472240 29180624 ~ 29186077 (-)
LOC110507915 LOC106581294 coding downstream 491755 29107795 ~ 29166562 (-)
LOC110507923 NA coding upstream 11281 29683759 ~ 29756087 (-)
LOC110507921 psmd2 coding upstream 84092 29756570 ~ 29777646 (-)
LOC110507919 LOC106580690 coding upstream 181979 29854457 ~ 29860929 (-)
LOC110507916 LOC106591944 coding upstream 208176 29880654 ~ 29884496 (-)
LOC110507932 kcne4 coding upstream 259149 29931627 ~ 29932989 (-)
G2071983 NA non-coding downstream 883 29657111 ~ 29657434 (-)
G2071963 NA non-coding downstream 32972 29625136 ~ 29625345 (-)
G2071957 NA non-coding downstream 37277 29620784 ~ 29621040 (-)
G2071956 NA non-coding downstream 37956 29620138 ~ 29620361 (-)
G2072267 NA non-coding upstream 33141 29705619 ~ 29706509 (-)
G2072288 LOC100196662 non-coding upstream 150039 29822517 ~ 29833885 (-)
G2072292 NA non-coding upstream 164884 29837362 ~ 29837950 (-)
G2072294 NA non-coding upstream 165779 29838257 ~ 29838479 (-)
G2072295 NA non-coding upstream 166673 29839151 ~ 29839519 (-)
G2071247 LOC106581281 other downstream 715589 28941354 ~ 28942728 (-)
G2070744 NA other downstream 1133767 28523946 ~ 28524550 (-)
G2070530 NA other downstream 1485775 28170838 ~ 28172542 (-)
LOC118944653 LOC106581256 other downstream 1768959 27872709 ~ 27889358 (-)
G2072732 NA other upstream 723297 30395775 ~ 30396680 (-)
G2074300 NA other upstream 2355150 32027628 ~ 32027967 (-)
G2076236 NA other upstream 3206311 32878789 ~ 32880888 (-)
G2077617 NA other upstream 5443904 35116382 ~ 35154043 (-)

Expression


Co-expression Network