Gene
RNA
| Item | Value |
|---|---|
| gene id | wdfy1 |
| gene name | LOC106613124 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 29837322 ~ 29854381 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: WD repeat and FYVE domain-containing protein 1-like |
| id | description |
|---|---|
| K23299 | WDFY1; WD repeat and FYVE domain-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021588338.2 | True | 4252 | mRNA | 0.46 | 12 | 29837322 | 29854381 |
29,832,000
29,834,000
29,836,000
29,838,000
29,840,000
29,842,000
29,844,000
29,846,000
29,848,000
29,850,000
29,852,000
29,854,000
29,856,000
29,858,000
29,860,000
29,862,000
29,864,000
29,866,000
29,868,000
29,870,000
NC_048591.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| serpine2 | LOC100196662 | coding | upstream | 3430 | 29827000 ~ 29833892 (+) |
| prss16 | LOC106581020 | coding | upstream | 15567 | 29777772 ~ 29821755 (+) |
| LOC110507925 | LOC105015878 | coding | upstream | 227398 | 29398701 ~ 29609924 (+) |
| LOC110507926 | LOC106581290 | coding | upstream | 484050 | 29301663 ~ 29353272 (+) |
| LOC110507927 | LOC106581292 | coding | upstream | 545987 | 29285656 ~ 29291335 (+) |
| LOC118944785 | NA | coding | downstream | 8351 | 29862732 ~ 29870795 (+) |
| LOC110507934 | LOC106581314 | coding | downstream | 145424 | 29999805 ~ 30015142 (+) |
| LOC118944764 | LOC107380793 | coding | downstream | 186914 | 30041295 ~ 30043448 (+) |
| LOC110507930 | LOC106613139 | coding | downstream | 198334 | 30052715 ~ 30088711 (+) |
| LOC110507933 | LOC106613135 | coding | downstream | 320361 | 30174742 ~ 30257517 (+) |
| G2072030 | NA | non-coding | upstream | 97963 | 29716230 ~ 29739359 (+) |
| G2072024 | NA | non-coding | upstream | 127071 | 29709649 ~ 29710251 (+) |
| G2072023 | NA | non-coding | upstream | 128221 | 29708894 ~ 29709101 (+) |
| G2072012 | NA | non-coding | upstream | 144231 | 29687952 ~ 29693091 (+) |
| G2072010 | NA | non-coding | upstream | 154061 | 29683025 ~ 29683261 (+) |
| G2072070 | NA | non-coding | downstream | 74 | 29854455 ~ 29860461 (+) |
| G2072111 | LOC106591944 | non-coding | downstream | 26291 | 29880672 ~ 29883093 (+) |
| G2072113 | NA | non-coding | downstream | 31135 | 29885516 ~ 29885781 (+) |
| G2072115 | NA | non-coding | downstream | 32332 | 29886713 ~ 29886947 (+) |
| G2071807 | NA | other | upstream | 197023 | 29638879 ~ 29640299 (+) |
| G2070010 | NA | other | upstream | 1922306 | 27896590 ~ 27915016 (+) |
| G2072178 | NA | other | downstream | 157084 | 30011465 ~ 30014824 (+) |
| G2072515 | NA | other | downstream | 415730 | 30270111 ~ 30271997 (+) |
| G2074226 | NA | other | downstream | 2111637 | 31966018 ~ 31974065 (+) |
| G2074227 | NA | other | downstream | 2114156 | 31968537 ~ 31976501 (+) |
| G2074502 | NA | other | downstream | 2342432 | 32196813 ~ 32197204 (+) |
