LOC110507932 (kcne4)


Basic Information

Item Value
gene id LOC110507932
gene name kcne4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 29931627 ~ 29932989 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021588354.2
CATTCGATAGGCGCACACTCCCACGAGGAGACGGATCACACTGCTGGGTTCACATGTTCCACCGTTCTGTTGCTCGGAAACTTTTCATTCCACCTCAAACTCCACTGAGGATGGAGAAGTCACACAACTTCACAACGCACCAAGTTCTTCCCCTGCAGAGGGCTAATGATGCTTCCCAAACCGACAAAAGCAATGGCAACGCATACGTGTACATTTTCATAGTGATCTCCTTCTATGGAGTCTTCCTCGTTGGTATAATGCTGGGCTATGTTCGCTCCAAAAGGCGGGAGAAGAGAAGATCGAACGTTTTTACGCGCCTGGTGCACGAGGAGGAGCAGCGGGAATGGGGCGCGCTGAAAAAGAAGCACAGCATCACCATGACCTCCTTCCAGGTATCGCTTCCCTTCTCCGCGGGGAGCCAGGATGTCAATGAAGGAAGGGTCCTGAGCTCCCCTCTGGCCTGCGCCCTGTTCTCCATTGAACAAACCAGTGTCAGTTCACTGTGCTCCTCCGCCGACGCGCGCTTTGCCATCGAGGAGGAGTCGGACAGCGGGACCGCGGAGGGACCGGACGAGACCCTGAAGGGCAGTTCTACTGACAACAGCGACGACTCCGCAGAGATACAGATACTCGGAGAGGAACTGTGACGCTCAGAACAGATGATGAGAGGGGAAATAAACGCAAAAAACTGTAGACTTTCCATCCCTCTCCGTCATATAGGAAATACGTGGAGAAGTTAAAGACTGATAAAGTTTAGCTTGACATATGGAACAATTGCTCTCTAACCATCAGGTTCTGAGTATTGAAACGTACCTGGAACCCACTTGAAATATATTTTCTGTAACGAAATCCTCTTAAGATGTAGCCTAATGATTTCACTGTGCAGTGTTCATAATGTCTATGTAGGTTTACTTGGGGTTGTTGTGTAAAgtgaagagaagaaaaaaaacagttgaAAAACAATGATCTGTTTAAGAAATATGGTTCTTCTTTACTCTTCTTGggaaatacatgtttttattttgaaaaaacgTTGTTGCAATATCTAGTTTTCTCCAAAAGGGGGCAGTGCTGCAGTAGTTTTACCCCACCTGTTGCTGGGGAACACCAGTCATTTCAGTAGAATCAACACAACATAGGGTTTACTGTCCTTGCATTGTCTTATTTGTTCTGAAGTGTTGACATACTAATTTATAAAATAAGAAGCTATTTTTTCAGGCA

Function

symbol description
kcne4 Predicted to enable potassium channel regulator activity and transmembrane transporter binding activity. Predicted to contribute to delayed rectifier potassium channel activity and voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization. Predicted to be involved in several processes, including ion transmembrane transport; regulation of heart rate by cardiac conduction; and regulation of ion transmembrane transport. Predicted to act upstream of or within ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human KCNE4 (potassium voltage-gated channel subfamily E regulatory subunit 4).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021588354.2 True 1221 mRNA 0.46 2 29931627 29932989

Neighbor

gene id symbol gene type direction distance location
LOC110507916 LOC106591944 coding downstream 47131 29880654 ~ 29884496 (-)
LOC110507919 LOC106580690 coding downstream 70698 29854457 ~ 29860929 (-)
LOC110507921 psmd2 coding downstream 153981 29756570 ~ 29777646 (-)
LOC110507923 NA coding downstream 175540 29683759 ~ 29756087 (-)
alp3 LOC106580686 coding downstream 259149 29658317 ~ 29672478 (-)
LOC110507928 acsl3 coding upstream 3914 29936903 ~ 29972053 (-)
LOC110507931 LOC106581313 coding upstream 57171 29990160 ~ 29994173 (-)
LOC110507937 acpl2 coding upstream 660786 30593775 ~ 30621882 (-)
LOC118944677 NA coding upstream 674840 30607829 ~ 30609111 (-)
LOC110507935 LOC106581306 coding upstream 750465 30683454 ~ 30724465 (-)
G2072339 NA non-coding downstream 4281 29926849 ~ 29927346 (-)
G2072329 NA non-coding downstream 18112 29913294 ~ 29913515 (-)
G2072328 NA non-coding downstream 18961 29912463 ~ 29912666 (-)
G2072322 NA non-coding downstream 40124 29891292 ~ 29891503 (-)
G2072310 NA non-coding downstream 51188 29878527 ~ 29880439 (-)
G2072359 NA non-coding upstream 64913 29997902 ~ 29998155 (-)
G2072307 LOC107380793 non-coding upstream 108759 30041748 ~ 30045631 (-)
G2072384 NA non-coding upstream 116558 30049547 ~ 30049775 (-)
G2072386 NA non-coding upstream 119734 30052723 ~ 30053256 (-)
G2072397 NA non-coding upstream 132996 30065985 ~ 30066219 (-)
G2072288 LOC100196662 other downstream 99918 29822517 ~ 29833885 (-)
zgc:165508 LOC106613118 other downstream 280160 29626155 ~ 29651489 (-)
G2071247 LOC106581281 other downstream 988899 28941354 ~ 28942728 (-)
G2070744 NA other downstream 1407077 28523946 ~ 28524550 (-)
G2070530 NA other downstream 1759085 28170838 ~ 28172542 (-)
G2072732 NA other upstream 462786 30395775 ~ 30396680 (-)
G2074300 NA other upstream 2094639 32027628 ~ 32027967 (-)
G2076236 NA other upstream 2945800 32878789 ~ 32880888 (-)
G2077617 NA other upstream 5183393 35116382 ~ 35154043 (-)
G2077934 NA other upstream 5501885 35434874 ~ 35435212 (-)

Expression


Co-expression Network