Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110507962 |
| gene name | LOC106613113 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048591.1 |
| NCBI id | CM023245.2 |
| chromosome length | 51556237 |
| location | 31332276 ~ 31358483 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 28S ribosomal protein S22, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036965093.1 | False | 1073 | mRNA | 0.45 | 3 | 31332276 | 31333611 |
| XR_005040000.1 | False | 775 | mRNA | 0.46 | 3 | 31332276 | 31333638 |
| XR_005040001.1 | False | 687 | mRNA | 0.47 | 3 | 31332276 | 31333666 |
| XM_021588388.2 | False | 786 | mRNA | 0.48 | 3 | 31332276 | 31358483 |
| TU2371001 | True | 440 | lncRNA | 0.53 | 3 | 31332570 | 31333597 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507154 | clstn2 | coding | downstream | 131479 | 30751075 ~ 31200797 (-) |
| LOC118944654 | LOC106613133 | coding | downstream | 588615 | 30739780 ~ 30743661 (-) |
| LOC110507935 | LOC106581306 | coding | downstream | 607811 | 30683454 ~ 30724465 (-) |
| LOC110507937 | acpl2 | coding | downstream | 710394 | 30593775 ~ 30621882 (-) |
| LOC118944677 | NA | coding | downstream | 723165 | 30607829 ~ 30609111 (-) |
| LOC110507961 | LOC106581358 | coding | upstream | 273064 | 31631547 ~ 31633359 (-) |
| LOC110507960 | LOC106581357 | coding | upstream | 277941 | 31636424 ~ 31638259 (-) |
| lpar5b | LOC106581285 | coding | upstream | 324444 | 31682927 ~ 31684215 (-) |
| gpr55a | LOC106581353 | coding | upstream | 330324 | 31688807 ~ 31695914 (-) |
| LOC110507954 | NA | coding | upstream | 344614 | 31701005 ~ 31707717 (-) |
| G2073619 | NA | non-coding | downstream | 3449 | 31327646 ~ 31328827 (-) |
| G2073602 | NA | non-coding | downstream | 27266 | 31304784 ~ 31305010 (-) |
| G2073601 | NA | non-coding | downstream | 28210 | 31303275 ~ 31304066 (-) |
| G2073597 | NA | non-coding | downstream | 36653 | 31294295 ~ 31295623 (-) |
| G2073592 | NA | non-coding | downstream | 65572 | 31264723 ~ 31266704 (-) |
| G2073635 | NA | non-coding | upstream | 8248 | 31366731 ~ 31366940 (-) |
| G2073761 | NA | non-coding | upstream | 62730 | 31421213 ~ 31427845 (-) |
| G2073812 | NA | non-coding | upstream | 227352 | 31585835 ~ 31587403 (-) |
| G2073855 | NA | non-coding | upstream | 229919 | 31588402 ~ 31588779 (-) |
| G2073856 | NA | non-coding | upstream | 233080 | 31591563 ~ 31591990 (-) |
| G2072732 | NA | other | downstream | 935596 | 30395775 ~ 30396680 (-) |
| G2072288 | LOC100196662 | other | downstream | 1500567 | 29822517 ~ 29833885 (-) |
| zgc:165508 | LOC106613118 | other | downstream | 1680809 | 29626155 ~ 29651489 (-) |
| G2071247 | LOC106581281 | other | downstream | 2389548 | 28941354 ~ 28942728 (-) |
| G2070744 | NA | other | downstream | 2807726 | 28523946 ~ 28524550 (-) |
| G2074300 | NA | other | upstream | 669145 | 32027628 ~ 32027967 (-) |
| G2076236 | NA | other | upstream | 1520306 | 32878789 ~ 32880888 (-) |
| G2077617 | NA | other | upstream | 3757899 | 35116382 ~ 35154043 (-) |
| G2077934 | NA | other | upstream | 4076391 | 35434874 ~ 35435212 (-) |
| G2077936 | NA | other | upstream | 4077111 | 35435594 ~ 35436257 (-) |
